bio-fasta_retrieve 0.0.5 → 0.0.6
Sign up to get free protection for your applications and to get access to all the features.
- checksums.yaml +4 -4
- data/lib/bio-fasta_retrieve.rb +1 -1
- metadata +1 -1
checksums.yaml
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
---
|
|
2
2
|
SHA1:
|
|
3
|
-
metadata.gz:
|
|
4
|
-
data.tar.gz:
|
|
3
|
+
metadata.gz: dee6c784422a63169682b043a7587d0ce71c0abe
|
|
4
|
+
data.tar.gz: b875ece7d6425a6c1ac8749facca0af88e16803e
|
|
5
5
|
SHA512:
|
|
6
|
-
metadata.gz:
|
|
7
|
-
data.tar.gz:
|
|
6
|
+
metadata.gz: 4b81eeb191d7f14b4d7ded126ea529fff5d5f09adf1760fb0175caf0fb1b494911335e6bde3b137b6cbbcbfd08d2b46da9575d3a6a0f3c3ce8cb0743b102edb5
|
|
7
|
+
data.tar.gz: bde158dd70066ad4ffa62ae25156e8291937736a92e32cdb65841ebecc9a8d06bf2fbfb357dda760508a4f572ac1896211187ca9af74884b690036b6c05926fb
|
data/lib/bio-fasta_retrieve.rb
CHANGED
|
@@ -28,7 +28,7 @@ module FastaRetriever
|
|
|
28
28
|
address="http://genome.ucsc.edu/cgi-bin/das/#{organism}/dna?segment=#{chr}:#{start_coord},#{end_coord}"
|
|
29
29
|
xml=ucsc_connect(address)
|
|
30
30
|
seq=compose_fasta(xml,organism,chr,start_coord,end_coord)
|
|
31
|
-
|
|
31
|
+
return seq
|
|
32
32
|
end # End retrieve
|
|
33
33
|
|
|
34
34
|
#connects to ucsc and retrieve xml with DNA sequence
|