bio-bwa 0.2.0 → 0.2.1

data/VERSION

@@ -1 +1 @@
-0.2.0
+0.2.1

data/bio-bwa.gemspec

@@ -5,7 +5,7 @@
 
 Gem::Specification.new do |s|
   s.name = %q{bio-bwa}
-  s.version = "0.2.0"
+  s.version = "0.2.1"
 
   s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
   s.authors = ["Francesco Strozzi"]

data/ext/mkrf_conf.rb

@@ -7,9 +7,12 @@ path = File.expand_path(File.dirname(__FILE__))
 ext = Bio::BWA::Library.lib_extension
 
 flags = ""
-case ext
-  when "so" then flags = "-shared -Wl,-soname,libbwa.so"
-  when "dylib" then flags = "-bundle -undefined dynamic_lookup -flat_namespace"
+compile = ""
+if ext == "so" then 
+  flags = "-shared -Wl,-soname,libbwa.so"
+  compile = " -fPIC"
+elsif ext == "dylib" then 
+  flags = "-bundle -undefined dynamic_lookup -flat_namespace"
 end
 
 
@@ -28,7 +31,7 @@ SRC = FileList.new(source)
 OBJ_SRC = SRC.ext('o')    
 
 rule '.o' => '.c' do |t|
-  sh "gcc -c -g -Wall -O2 -DHAVE_PTHREAD "+t.source+" -o "+t.name
+  sh "gcc#{compile} -c -g -Wall -O2 -DHAVE_PTHREAD "+t.source+" -o "+t.name
 end
     
 task :compile_gen => OBJ_GEN do

metadata

@@ -2,7 +2,7 @@
 name: bio-bwa
 version: !ruby/object:Gem::Version 
   prerelease: 
-  version: 0.2.0
+  version: 0.2.1
 platform: ruby
 authors: 
 - Francesco Strozzi
@@ -193,7 +193,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
   requirements: 
   - - ">="
     - !ruby/object:Gem::Version 
-      hash: -1510626449413692226
+      hash: 4340680635889925371
       segments: 
       - 0
       version: "0"