biborg 0.1.a

data/LICENSE

@@ -0,0 +1,339 @@
+		    GNU GENERAL PUBLIC LICENSE
+		       Version 2, June 1991
+
+ Copyright (C) 1989, 1991 Free Software Foundation, Inc.,
+ 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
+ Everyone is permitted to copy and distribute verbatim copies
+ of this license document, but changing it is not allowed.
+
+			    Preamble
+
+  The licenses for most software are designed to take away your
+freedom to share and change it.  By contrast, the GNU General Public
+License is intended to guarantee your freedom to share and change free
+software--to make sure the software is free for all its users.  This
+General Public License applies to most of the Free Software
+Foundation's software and to any other program whose authors commit to
+using it.  (Some other Free Software Foundation software is covered by
+the GNU Lesser General Public License instead.)  You can apply it to
+your programs, too.
+
+  When we speak of free software, we are referring to freedom, not
+price.  Our General Public Licenses are designed to make sure that you
+have the freedom to distribute copies of free software (and charge for
+this service if you wish), that you receive source code or can get it
+if you want it, that you can change the software or use pieces of it
+in new free programs; and that you know you can do these things.
+
+  To protect your rights, we need to make restrictions that forbid
+anyone to deny you these rights or to ask you to surrender the rights.
+These restrictions translate to certain responsibilities for you if you
+distribute copies of the software, or if you modify it.
+
+  For example, if you distribute copies of such a program, whether
+gratis or for a fee, you must give the recipients all the rights that
+you have.  You must make sure that they, too, receive or can get the
+source code.  And you must show them these terms so they know their
+rights.
+
+  We protect your rights with two steps: (1) copyright the software, and
+(2) offer you this license which gives you legal permission to copy,
+distribute and/or modify the software.
+
+  Also, for each author's protection and ours, we want to make certain
+that everyone understands that there is no warranty for this free
+software.  If the software is modified by someone else and passed on, we
+want its recipients to know that what they have is not the original, so
+that any problems introduced by others will not reflect on the original
+authors' reputations.
+
+  Finally, any free program is threatened constantly by software
+patents.  We wish to avoid the danger that redistributors of a free
+program will individually obtain patent licenses, in effect making the
+program proprietary.  To prevent this, we have made it clear that any
+patent must be licensed for everyone's free use or not licensed at all.
+
+  The precise terms and conditions for copying, distribution and
+modification follow.
+
+		    GNU GENERAL PUBLIC LICENSE
+   TERMS AND CONDITIONS FOR COPYING, DISTRIBUTION AND MODIFICATION
+
+  0. This License applies to any program or other work which contains
+a notice placed by the copyright holder saying it may be distributed
+under the terms of this General Public License.  The "Program", below,
+refers to any such program or work, and a "work based on the Program"
+means either the Program or any derivative work under copyright law:
+that is to say, a work containing the Program or a portion of it,
+either verbatim or with modifications and/or translated into another
+language.  (Hereinafter, translation is included without limitation in
+the term "modification".)  Each licensee is addressed as "you".
+
+Activities other than copying, distribution and modification are not
+covered by this License; they are outside its scope.  The act of
+running the Program is not restricted, and the output from the Program
+is covered only if its contents constitute a work based on the
+Program (independent of having been made by running the Program).
+Whether that is true depends on what the Program does.
+
+  1. You may copy and distribute verbatim copies of the Program's
+source code as you receive it, in any medium, provided that you
+conspicuously and appropriately publish on each copy an appropriate
+copyright notice and disclaimer of warranty; keep intact all the
+notices that refer to this License and to the absence of any warranty;
+and give any other recipients of the Program a copy of this License
+along with the Program.
+
+You may charge a fee for the physical act of transferring a copy, and
+you may at your option offer warranty protection in exchange for a fee.
+
+  2. You may modify your copy or copies of the Program or any portion
+of it, thus forming a work based on the Program, and copy and
+distribute such modifications or work under the terms of Section 1
+above, provided that you also meet all of these conditions:
+
+    a) You must cause the modified files to carry prominent notices
+    stating that you changed the files and the date of any change.
+
+    b) You must cause any work that you distribute or publish, that in
+    whole or in part contains or is derived from the Program or any
+    part thereof, to be licensed as a whole at no charge to all third
+    parties under the terms of this License.
+
+    c) If the modified program normally reads commands interactively
+    when run, you must cause it, when started running for such
+    interactive use in the most ordinary way, to print or display an
+    announcement including an appropriate copyright notice and a
+    notice that there is no warranty (or else, saying that you provide
+    a warranty) and that users may redistribute the program under
+    these conditions, and telling the user how to view a copy of this
+    License.  (Exception: if the Program itself is interactive but
+    does not normally print such an announcement, your work based on
+    the Program is not required to print an announcement.)
+
+These requirements apply to the modified work as a whole.  If
+identifiable sections of that work are not derived from the Program,
+and can be reasonably considered independent and separate works in
+themselves, then this License, and its terms, do not apply to those
+sections when you distribute them as separate works.  But when you
+distribute the same sections as part of a whole which is a work based
+on the Program, the distribution of the whole must be on the terms of
+this License, whose permissions for other licensees extend to the
+entire whole, and thus to each and every part regardless of who wrote it.
+
+Thus, it is not the intent of this section to claim rights or contest
+your rights to work written entirely by you; rather, the intent is to
+exercise the right to control the distribution of derivative or
+collective works based on the Program.
+
+In addition, mere aggregation of another work not based on the Program
+with the Program (or with a work based on the Program) on a volume of
+a storage or distribution medium does not bring the other work under
+the scope of this License.
+
+  3. You may copy and distribute the Program (or a work based on it,
+under Section 2) in object code or executable form under the terms of
+Sections 1 and 2 above provided that you also do one of the following:
+
+    a) Accompany it with the complete corresponding machine-readable
+    source code, which must be distributed under the terms of Sections
+    1 and 2 above on a medium customarily used for software interchange; or,
+
+    b) Accompany it with a written offer, valid for at least three
+    years, to give any third party, for a charge no more than your
+    cost of physically performing source distribution, a complete
+    machine-readable copy of the corresponding source code, to be
+    distributed under the terms of Sections 1 and 2 above on a medium
+    customarily used for software interchange; or,
+
+    c) Accompany it with the information you received as to the offer
+    to distribute corresponding source code.  (This alternative is
+    allowed only for noncommercial distribution and only if you
+    received the program in object code or executable form with such
+    an offer, in accord with Subsection b above.)
+
+The source code for a work means the preferred form of the work for
+making modifications to it.  For an executable work, complete source
+code means all the source code for all modules it contains, plus any
+associated interface definition files, plus the scripts used to
+control compilation and installation of the executable.  However, as a
+special exception, the source code distributed need not include
+anything that is normally distributed (in either source or binary
+form) with the major components (compiler, kernel, and so on) of the
+operating system on which the executable runs, unless that component
+itself accompanies the executable.
+
+If distribution of executable or object code is made by offering
+access to copy from a designated place, then offering equivalent
+access to copy the source code from the same place counts as
+distribution of the source code, even though third parties are not
+compelled to copy the source along with the object code.
+
+  4. You may not copy, modify, sublicense, or distribute the Program
+except as expressly provided under this License.  Any attempt
+otherwise to copy, modify, sublicense or distribute the Program is
+void, and will automatically terminate your rights under this License.
+However, parties who have received copies, or rights, from you under
+this License will not have their licenses terminated so long as such
+parties remain in full compliance.
+
+  5. You are not required to accept this License, since you have not
+signed it.  However, nothing else grants you permission to modify or
+distribute the Program or its derivative works.  These actions are
+prohibited by law if you do not accept this License.  Therefore, by
+modifying or distributing the Program (or any work based on the
+Program), you indicate your acceptance of this License to do so, and
+all its terms and conditions for copying, distributing or modifying
+the Program or works based on it.
+
+  6. Each time you redistribute the Program (or any work based on the
+Program), the recipient automatically receives a license from the
+original licensor to copy, distribute or modify the Program subject to
+these terms and conditions.  You may not impose any further
+restrictions on the recipients' exercise of the rights granted herein.
+You are not responsible for enforcing compliance by third parties to
+this License.
+
+  7. If, as a consequence of a court judgment or allegation of patent
+infringement or for any other reason (not limited to patent issues),
+conditions are imposed on you (whether by court order, agreement or
+otherwise) that contradict the conditions of this License, they do not
+excuse you from the conditions of this License.  If you cannot
+distribute so as to satisfy simultaneously your obligations under this
+License and any other pertinent obligations, then as a consequence you
+may not distribute the Program at all.  For example, if a patent
+license would not permit royalty-free redistribution of the Program by
+all those who receive copies directly or indirectly through you, then
+the only way you could satisfy both it and this License would be to
+refrain entirely from distribution of the Program.
+
+If any portion of this section is held invalid or unenforceable under
+any particular circumstance, the balance of the section is intended to
+apply and the section as a whole is intended to apply in other
+circumstances.
+
+It is not the purpose of this section to induce you to infringe any
+patents or other property right claims or to contest validity of any
+such claims; this section has the sole purpose of protecting the
+integrity of the free software distribution system, which is
+implemented by public license practices.  Many people have made
+generous contributions to the wide range of software distributed
+through that system in reliance on consistent application of that
+system; it is up to the author/donor to decide if he or she is willing
+to distribute software through any other system and a licensee cannot
+impose that choice.
+
+This section is intended to make thoroughly clear what is believed to
+be a consequence of the rest of this License.
+
+  8. If the distribution and/or use of the Program is restricted in
+certain countries either by patents or by copyrighted interfaces, the
+original copyright holder who places the Program under this License
+may add an explicit geographical distribution limitation excluding
+those countries, so that distribution is permitted only in or among
+countries not thus excluded.  In such case, this License incorporates
+the limitation as if written in the body of this License.
+
+  9. The Free Software Foundation may publish revised and/or new versions
+of the General Public License from time to time.  Such new versions will
+be similar in spirit to the present version, but may differ in detail to
+address new problems or concerns.
+
+Each version is given a distinguishing version number.  If the Program
+specifies a version number of this License which applies to it and "any
+later version", you have the option of following the terms and conditions
+either of that version or of any later version published by the Free
+Software Foundation.  If the Program does not specify a version number of
+this License, you may choose any version ever published by the Free Software
+Foundation.
+
+  10. If you wish to incorporate parts of the Program into other free
+programs whose distribution conditions are different, write to the author
+to ask for permission.  For software which is copyrighted by the Free
+Software Foundation, write to the Free Software Foundation; we sometimes
+make exceptions for this.  Our decision will be guided by the two goals
+of preserving the free status of all derivatives of our free software and
+of promoting the sharing and reuse of software generally.
+
+			    NO WARRANTY
+
+  11. BECAUSE THE PROGRAM IS LICENSED FREE OF CHARGE, THERE IS NO WARRANTY
+FOR THE PROGRAM, TO THE EXTENT PERMITTED BY APPLICABLE LAW.  EXCEPT WHEN
+OTHERWISE STATED IN WRITING THE COPYRIGHT HOLDERS AND/OR OTHER PARTIES
+PROVIDE THE PROGRAM "AS IS" WITHOUT WARRANTY OF ANY KIND, EITHER EXPRESSED
+OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
+MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.  THE ENTIRE RISK AS
+TO THE QUALITY AND PERFORMANCE OF THE PROGRAM IS WITH YOU.  SHOULD THE
+PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF ALL NECESSARY SERVICING,
+REPAIR OR CORRECTION.
+
+  12. IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING
+WILL ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MAY MODIFY AND/OR
+REDISTRIBUTE THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES,
+INCLUDING ANY GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING
+OUT OF THE USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED
+TO LOSS OF DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY
+YOU OR THIRD PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER
+PROGRAMS), EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE
+POSSIBILITY OF SUCH DAMAGES.
+
+		     END OF TERMS AND CONDITIONS
+
+	    How to Apply These Terms to Your New Programs
+
+  If you develop a new program, and you want it to be of the greatest
+possible use to the public, the best way to achieve this is to make it
+free software which everyone can redistribute and change under these terms.
+
+  To do so, attach the following notices to the program.  It is safest
+to attach them to the start of each source file to most effectively
+convey the exclusion of warranty; and each file should have at least
+the "copyright" line and a pointer to where the full notice is found.
+
+    <one line to give the program's name and a brief idea of what it does.>
+    Copyright (C) <year>  <name of author>
+
+    This program is free software; you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation; either version 2 of the License, or
+    (at your option) any later version.
+
+    This program is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License along
+    with this program; if not, write to the Free Software Foundation, Inc.,
+    51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+
+Also add information on how to contact you by electronic and paper mail.
+
+If the program is interactive, make it output a short notice like this
+when it starts in an interactive mode:
+
+    Gnomovision version 69, Copyright (C) year name of author
+    Gnomovision comes with ABSOLUTELY NO WARRANTY; for details type `show w'.
+    This is free software, and you are welcome to redistribute it
+    under certain conditions; type `show c' for details.
+
+The hypothetical commands `show w' and `show c' should show the appropriate
+parts of the General Public License.  Of course, the commands you use may
+be called something other than `show w' and `show c'; they could even be
+mouse-clicks or menu items--whatever suits your program.
+
+You should also get your employer (if you work as a programmer) or your
+school, if any, to sign a "copyright disclaimer" for the program, if
+necessary.  Here is a sample; alter the names:
+
+  Yoyodyne, Inc., hereby disclaims all copyright interest in the program
+  `Gnomovision' (which makes passes at compilers) written by James Hacker.
+
+  <signature of Ty Coon>, 1 April 1989
+  Ty Coon, President of Vice
+
+This General Public License does not permit incorporating your program into
+proprietary programs.  If your program is a subroutine library, you may
+consider it more useful to permit linking proprietary applications with the
+library.  If this is what you want to do, use the GNU Lesser General
+Public License instead of this License.

data/README

@@ -0,0 +1,5 @@
+For searches, use FERRET style keywords. Eg.,
+
+color constancy
+author: Chakrabarti
+color && year: (> 2005)

data/bin/biborg

@@ -0,0 +1,69 @@
+#!/usr/bin/env ruby
+
+require 'rubygems'
+require 'erb'
+
+gem 'rack', '= 1.1.0'
+require 'rack'
+
+require 'cgi'
+
+libdir = File.expand_path(File.dirname(__FILE__)+'/../lib')
+$:.unshift libdir
+require 'biborg/parsebib'
+require 'biborg/webapp'
+
+include Biborg
+$basedir = libdir + '/biborg'
+
+theport = 6412
+
+def usage
+    $stderr.puts "USAGE: biborg [-p port] bibfile"
+    exit(1)
+end
+
+usage if ARGV.length < 1
+if ARGV[0] == '-p'
+  ARGV.shift
+  usage if ARGV.length < 1
+  theport = Integer(ARGV.shift)
+  usage if ARGV.length < 1
+end
+
+
+$bibfile = File.expand_path(ARGV[0])
+s = ''
+begin
+  File.open($bibfile,'r') { |f| s = f.read}
+  $bib,str = getbib(s)
+  if str.length > 0
+    $stderr.puts "PARSE ERROR:" + str
+    raise 0
+  end
+rescue
+  $stderr.puts "Error parsing #{$bibfile}"
+  exit(1)
+end
+
+$searchurl = 'http://scholar.google.com/scholar?q='
+
+begin
+  Rack::Handler::Mongrel.run(webapp, :Host=>"127.0.0.1", :Port=>theport) { |x|
+    if pid = Kernel.fork then
+      Process.detach(pid)
+      puts "Server running with PID=#{String(pid)}\n"
+      if RUBY_PLATFORM =~ /darwin/
+        system("open http://127.0.0.1:#{String(theport)}/");
+      else
+        puts "Go to http://127.0.0.1:#{String(theport)}/ to browse bibliography!\n"
+      end
+      exit(0)
+    end
+    $stderr.reopen('/dev/null','w')
+    $stdout.reopen('/dev/null','w')
+  }
+rescue
+  STDERR.write "Could not listen on port #{String(theport)}.\n"
+  exit(1)
+end

data/lib/biborg/parsebib.rb

@@ -0,0 +1,158 @@
+require 'rubygems'
+require 'ferret'
+include Ferret
+
+module Biborg
+
+SYM_EOF = 0
+SYM_AT = 1
+SYM_COMMA = 2
+SYM_NUM = 3
+SYM_EQ = 4
+SYM_STR = 5
+SYM_CLOSE = 6
+SYM_OPEN = 7
+
+# Returns [type,string,next]
+def getnext(str,ifbrace = 1)
+  # Parse tokens
+  str.lstrip! if str
+  return SYM_EOF, nil, str if !str || str.length == 0
+  
+  if str[0..0] == '@'
+    return SYM_AT, '@', str[1..-1]
+  elsif str[0..0] == ','
+    return SYM_COMMA, ',', str[1..-1]
+  elsif str =~ /\A[0-9]+/m
+    return SYM_NUM, $~[0], $~.post_match
+  elsif str[0..0] == '='
+    return SYM_EQ, '=', str[1..-1]
+  elsif str =~ /\A[^\s\,\"\=\{\}@]+/m
+    return SYM_STR, $~[0], $~.post_match
+  elsif str[0..0] == '}'
+    return SYM_CLOSE, '}', str[1..-1]
+  elsif str[0..0] == '{' && ifbrace == 1
+    return SYM_OPEN, '{', str[1..-1]
+  end
+
+  if ifbrace == 0
+
+    # String literal with braces
+    if str[0..0] = '{'
+      rval = ''
+      count = 1
+      bstr = str[1..-1]
+
+      while count > 0
+        if bstr =~ /\A[^\{\}]*([\{\}])/m
+          count = count + 1 if $~[1] == '{';
+          count = count - 1 if $~[1] == '}';
+          rval = rval + $~[0]
+          bstr = $~.post_match
+        else
+          puts 'brace error'
+          return nil, nil, str
+        end
+      end
+      rval = rval[0..-2]
+      
+      while true
+        r = rval.strip
+        break if r.length < 2
+        if r[0..0] == '{' && r[-1..-1] == '}'
+          rval = r[1..-2];
+        else
+          break
+        end
+      end
+
+
+      return SYM_STR, rval, bstr
+    end
+
+    # String literal with quotes and #
+    # TODO
+  end
+  
+  return nil, nil, str
+end
+
+def context(s)
+  return '!' if !s
+  return s if s.length < 10
+  return s[0..10]
+end
+
+def getbib(s)
+
+  # Ignore comments
+  s.gsub!(/^\s*%.*$/,'') if s
+  
+  r = Hash.new
+
+  sold = s; t,b,s = getnext(s)
+  while t != SYM_EOF
+    return r, 'Expected @ at: ' + context(sold) if t != SYM_AT
+        
+    sold = s; t,b,s = getnext(s)
+    return r, 'Expected reftype at: ' + context(sold) if t != SYM_STR
+    reftype = b.downcase
+
+    sold = s; t,b,s = getnext(s)
+    return r, 'Expected { at: ' + context(sold) if t != SYM_OPEN
+
+    sold = s; t,b,s = getnext(s)
+    return r, 'Expected keyname at: ' + context(sold) if t != SYM_STR
+    keyname = b.downcase
+    
+    fields = Hash.new
+    while true
+      sold = s; t,b,s = getnext(s)
+      return r, 'Unexpected token (expect , or }) at: ' + context(sold) if t != SYM_CLOSE && t != SYM_COMMA
+      sold = s; t,b,s = getnext(s) if t == SYM_COMMA
+      break if t == SYM_CLOSE
+      
+      return r, 'Unexpected token (expect fieldname) at: ' + context(sold) if t != SYM_STR
+      field = b.downcase
+      sold = s; t,b,s = getnext(s)
+      return r, 'Expected = at: ' + context(sold) if t != SYM_EQ
+      sold = s; t,b,s = getnext(s,0)
+      return r, 'Unexpected token (expect value) at: ' + context(sold) if t != SYM_STR && t != SYM_NUM
+      fields[field] = b;
+    end
+
+    r[keyname] = [keyname, reftype, fields];
+    sold = s; t,b,s = getnext(s)    
+  end
+
+  return r, ''
+end
+
+def putentry(b)
+  s = ''
+  s = s + '@' + b[1] + '{' + b[0] + ",\n"
+  s = s + b[2].sort.collect{ |k| '    ' + k[0] + ' = ' + '{' +  k[1] + '}'}.join(",\n")
+  s = s + "\n}"
+
+  return s
+end
+
+def putentries(b)
+  return b.sort.collect{|v| putentry(v[1])}.join("\n\n") 
+end
+
+def bibquery(b,s)
+  results = Array.new
+  # Build Index
+  index = Index::Index.new();
+  b.each_pair {|k,v|
+    h = {:id => v[0]};
+    v[2].each_pair { |fk,fv| h[fk.to_sym] = fv}
+    index << h
+  }
+  index.search_each(s, {:limit => :all}) { |id,score| results << index[id][:id]} 
+  index.close
+  return results
+end
+
+end

data/lib/biborg/rhtml/authors.html

@@ -0,0 +1,119 @@
+<html>
+<%
+   if req["athrs"] && req["changeto"]
+
+     cfrom = req["athrs"].collect {|a| a.strip}
+     $bib.each_key{|k|
+        if $bib[k][2].has_key?('author')
+           athrs = $bib[k][2]['author'].split(' and ')
+           athrs = athrs.collect { |a|
+             if cfrom.include?(a.strip) then
+                 req["changeto"]
+             else
+                 a
+             end
+           }
+           $bib[k][2]['author'] = athrs.join(' and ')
+        end
+     }
+     File.open($bibfile,'w') {|f| f.write(putentries($bib))}
+   end
+
+
+   authors = Hash.new
+   $bib.each_value {|b|
+     if b[2].has_key?('author')
+        a = b[2]['author']
+        a = a.split(' and ')
+        a.each { |t| authors[t.strip] = t.strip }
+     end
+   }
+   authors = authors.keys.sort
+%>
+<head>
+<title>BibOrg: <%= $bibfile %></title>
+<style type="text/css">
+a.alink {
+ padding: 2px;
+ text-decoration: none;
+ font-size:0.75em;
+ font-weight: bold;
+ color: #000000
+}
+a.alink:hover {
+ background-color: #fff
+}
+</style>
+
+<script type="text/javascript">
+function update()
+{
+   l = document.getElementsByName("athrs[]");
+   t = document.getElementsByName("changeto");
+
+   for(i = 0; i < l.length;i++)
+     if(l[i].checked)
+       if(l[i].value.length > t[0].value.length)
+           t[0].value = l[i].value;
+}
+
+function clearsel()
+{
+   l = document.getElementsByName("athrs[]");
+   for(i = 0; i < l.length;i++)
+         l[i].checked = false;
+   t = document.getElementsByName("changeto");
+   t[0].value = ''
+}
+</script>
+
+
+</head>
+
+<body style="background: #444; padding-top: 4px">
+<center>
+<form action="/authors.html" METHOD="POST">
+<table style="width:61em; border-spacing: 0px;">
+  <tr style="background: #888;">
+    <td style="text-align: left; font-size: 0.8em">
+      &nbsp;Change Selected To: <input name='changeto' value='' style="width:30em; border:0px">
+      <input type=submit value='Change'>
+      &nbsp;<a href="javascript:" onClick="clearsel()" class="alink">Clear</a>
+    </td>
+    <td style="text-align: right">
+      <a href="/" class="alink">Library</a>
+    </td>
+  </tr>
+</table>
+
+
+<table style="width:61em; background: #ddd">
+<%
+  tropen = 0
+  for i in 0..(authors.length-1)
+    if tropen == 0
+%>
+    <tr>
+<%
+     tropen = 1
+    end
+%>
+<td style="width: 14em; vertical-align: top; font-size: 0.8em">
+  <input onChange="update()" type="checkbox" name="athrs[]" value="<%= authors[i] %>">
+  <%= authors[i] %>
+</td>
+<%
+   if i.modulo(4) == 3 then
+      tropen = 0
+%></tr><%
+   end
+  end
+  if tropen == 1 then
+%></tr><%
+  end
+%>
+</table>
+</form>
+</center>
+</body>
+</html>

data/lib/biborg/rhtml/edit.html

@@ -0,0 +1,84 @@
+<html>
+
+<%
+
+   if ! req["key"] || req["key"].length == 0 || ! $bib.has_key?(req["key"])
+        thekey = ''
+        msg = 'Invalid Key'
+        binit = ''
+   else
+        thekey = req["key"]
+        msg = ''
+        binit = putentry($bib[thekey])
+
+        if req["import"]
+           bimp, str = getbib(req["bib"])
+           str = 'Too many entries. Use Import instead.' if bimp.length > 1 && str.length == 0
+           str = 'No entry found. Use Delete instead.' if bimp.length < 1 && str.length == 0
+           if str.length == 0
+            $bib.delete(thekey)
+            $bib.merge!(bimp)
+            File.open($bibfile,'w') {|f| f.write(putentries($bib))}
+            msg = 'Entry updated'
+            thekey = bimp.keys[0]
+            binit = putentry($bib[thekey])
+           else
+             binit = req["bib"]
+             msg = str
+           end
+        end
+   end
+%>
+
+<head>
+<title>BibOrg: <%= $bibfile %></title>
+<style type="text/css">
+a.alink {
+ padding: 2px;
+ text-decoration: none;
+ font-size:0.75em;
+ font-weight: bold;
+ color: #000000
+}
+a.alink:hover {
+ background-color: #fff
+}
+</style>
+<script type="text/javascript">
+function iform()
+{
+  l = document.getElementsByName("iForm");
+  l[0].submit();
+}
+</script>
+</head>
+
+<body style="background: #444;">
+
+<center>
+<form method="POST" action="/edit.html?key=<%= thekey%>" name="iForm">
+<input type="hidden" name="import" value="1">
+   
+<table style="width:61em; border-spacing: 0px; padding: 4px;">
+  <tr style="background: #ccc;">
+    <td style="text-aligh: left"><%= msg %></td>
+    <td style="text-align: right">
+      <a href="javascript:" onClick="iform()" class="alink">Update</a>&nbsp;
+      <a href="/" class="alink">Library</a>&nbsp;
+      <a href="/die" class="alink">Exit</a>
+    </td>
+  </tr>
+</table>
+
+<table style="width:61em; border-spacing: 0px; padding: 4px;">
+  <tr><td>
+      <textarea style="width:100%; border: 0px; height: 100em" name="bib"><%= binit %></textarea>
+  </td></tr>
+</table>
+
+
+
+</form>
+</center>
+
+</html>

data/lib/biborg/rhtml/import.html

@@ -0,0 +1,70 @@
+<html>
+
+<%
+   msg = ''
+   binit = ''
+   if req["import"]
+       bimp, str = getbib(req["bib"])
+       if str.length == 0
+            $bib.merge!(bimp)
+            File.open($bibfile,'w') {|f| f.write(putentries($bib))}
+            msg = String(bimp.length) + ' entries added.'
+       else
+            binit = req["bib"]
+            msg = str
+       end
+   end
+%>
+
+<head>
+<title>BibOrg: <%= $bibfile %></title>
+<style type="text/css">
+a.alink {
+ padding: 2px;
+ text-decoration: none;
+ font-size:0.75em;
+ font-weight: bold;
+ color: #000000
+}
+a.alink:hover {
+ background-color: #fff
+}
+</style>
+<script type="text/javascript">
+function iform()
+{
+  l = document.getElementsByName("iForm");
+  l[0].submit();
+}
+</script>
+</head>
+
+<body style="background: #444;">
+
+<center>
+<form method="POST" action="/import.html" name="iForm">
+<input type="hidden" name="import" value="1">
+   
+<table style="width:61em; border-spacing: 0px; padding: 4px;">
+  <tr style="background: #ccc;">
+    <td style="text-align: left"><%= msg %></td>
+    <td style="text-align: right">
+      <a href="javascript:" onClick="iform()" class="alink">Add</a>&nbsp;
+      <a href="/" class="alink">Library</a>&nbsp;
+      <a href="/die" class="alink">Exit</a>
+    </td>
+  </tr>
+</table>
+
+<table style="width:61em; border-spacing: 0px; padding: 4px;">
+  <tr><td>
+      <textarea style="width:100%; border: 0px; height: 100em" name="bib"><%= binit %></textarea>
+  </td></tr>
+</table>
+
+
+
+</form>
+</center>
+
+</html>

data/lib/biborg/rhtml/index.html

@@ -0,0 +1,174 @@
+<html>
+
+<%
+
+def yearsort(a,b)
+   return $bib[b][2]['year'] <=> $bib[a][2]['year'] if $bib[a][2].has_key?('year') && $bib[b][2].has_key?('year')
+   return -1 if $bib[a][2].has_key?('year')
+   return 1  if $bib[b][2].has_key?('year')
+   return a <=> b
+end
+
+
+if req["delete"] && req["selkeys"].length > 0
+  dkeys = req["selkeys"].split(",");
+  dkeys.each { |k|
+     $bib.delete(k) if $bib.has_key?(k)
+  }
+  File.open($bibfile,'w') {|f| f.write(putentries($bib))}
+  klst = $bib.keys.sort{|a,b| yearsort(a,b) }
+elsif req["search"] && req["search"].length > 0
+  klst = bibquery($bib,req["search"])
+else
+  klst = $bib.keys.sort{|a,b| yearsort(a,b)}
+end
+%>
+
+<head>
+<title>BibOrg: <%= $bibfile %></title>
+<style type="text/css">
+a.title {
+   text-decoration: none;
+   color: #119;
+}
+a.title:hover {
+   background-color: #faa
+}
+
+a.author {
+   text-decoration: none;
+   font-weight: bold;
+   color: #058;
+}
+a.author:hover {
+   background-color: #faa
+}
+
+a.alink {
+ padding: 2px;
+ text-decoration: none;
+ font-size:0.75em;
+ font-weight: bold;
+ color: #000000
+}
+a.alink:hover {
+ background-color: #fff
+}
+</style>
+
+<script type="text/javascript">
+function deleteForm()
+{
+  l = document.getElementsByName("dForm");
+  if(confirm("Delete selected items ?")) l[0].submit();
+}
+
+function selectall(me)
+{
+   l = document.getElementsByName("keys[]");
+    for(i = 0; i < l.length;i++)
+          l[i].checked = me.checked;
+   update();
+}
+
+function update() {
+    val = '';
+    l = document.getElementsByName("keys[]");
+    for(i = 0; i < l.length;i++)
+          if(l[i].checked)
+              val = val + l[i].value + ',';
+
+   if(val.length > 0)
+     val = val.substring(0,val.length-1);
+   l = document.getElementsByName("selkeys");
+   l[0].value = val;
+}
+</script>
+</head>
+
+<body style="background: #444;">
+<center>
+<table style="width:61em; border-spacing: 0px; padding: 4px;">
+  <form method="GET" action="/" name="dForm">
+  <tr style="background: #ccc;">
+    <td>
+      <input type="hidden" name="delete" value="1">
+      <input onFocus="this.select()" name="selkeys" value = "" style="width:45em; border:0px;" readonly>
+      &nbsp;&nbsp;<a href="javascript:" onClick="deleteForm()" class="alink">Delete</a>
+    </td>
+    <td style="text-align: right">
+      <a href="/authors.html" class="alink">Authors</a>&nbsp;
+      <a href="/journals.html" class="alink">Journals</a>&nbsp;
+      <a href="/import.html" class="alink">Import</a>&nbsp;
+      <a href="/die" class="alink">Exit</a>
+    </td>
+  </tr>
+  </form>
+</table>
+<table style="width:61em">
+  <form action="/" method="GET">
+  <tr style="background: #afa;">
+    <td style="width:3em"><input type="checkbox" onChange="selectall(this)"></td>
+    <td style="width:58em; text-align: right">
+      <input style="width: 45em; border: 0px" name="search">
+      <input type="submit" value="Search">
+    </td>
+  </tr>
+  </form>
+</table>
+
+<table style="width:61em;">
+<%
+  if klst.length == 0
+%>
+  <tr style="background: #fff">
+    <td><br>&nbsp;&nbsp;No bibliography items found.<br>&nbsp;</td>
+  </tr>
+<%
+  else
+    clrs = ['#ddd','#eee']
+    i = 0
+    klst.each do |k|
+    i = (i+1).modulo(2) 
+
+    if $bib[k][2].has_key?('title') && $bib[k][2]['title'].length > 0
+       text = '<b><a class="title" target=_BLANK href="'+$searchurl+CGI.escape('"'+$bib[k][2]['title'] + '"')+'">'+$bib[k][2]['title']+'</a></b>'
+
+       year = '<b>'+$bib[k][2]['year']+'</b>' if $bib[k][2].has_key?('year')
+       year ||= ''
+
+       btitle = nil
+       btitle = $bib[k][2]['booktitle'] if $bib[k][2].has_key?('booktitle')
+       btitle = $bib[k][2]['journal'] if $bib[k][2].has_key?('journal')
+       if btitle
+         text = text + '<br>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;' + CGI.escapeHTML(btitle)
+       end
+       if $bib[k][2].has_key?('author') && $bib[k][2]['author'].length > 0
+          authors = $bib[k][2]['author'].split(" and ")
+          authors = authors.collect{ |a| '<a class="author" href="/?search='+CGI.escape('author:"'+a+'"')+'">'+a+'</a>'}
+          text = text + '<br>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<i>' + authors.join(" and ") + '</i>'
+       end
+  else
+      text = '<b>['+k+']</b>'
+      $bib[k][2].each_pair { |fk,fv|
+            text = text + '<br>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;'
+            text = text + CGI.escapeHTML(fk) + ' = {' + CGI.escapeHTML(fv) + '}'
+      }
+   end
+%>
+  <tr style="background: <%= clrs[i] %>">
+    <td style="width: 3em"><input type="checkbox" onChange="update()" name="keys[]" value="<%= k %>">
+      <a href="/edit.html?key=<%= k%>"><img src="/static/pencil.png" style="width:1em; border:0px" alt="[edit]"></a>
+    </td>
+    <td style="width: 53em">
+    <%= text %>
+    </td>
+    <td style="width: 5em; text-align: center; font-size: 0.8em"><%= year %></td>
+<%
+    end
+  end
+%>
+</table>
+</center>
+
+</html>

data/lib/biborg/rhtml/journals.html

@@ -0,0 +1,98 @@
+<html>
+<%
+   if req["jrnls"] && req["changeto"]
+
+     cfrom = req["jrnls"].collect {|a| a.strip}
+     $bib.each_key{|k|
+        if $bib[k][2].has_key?('journal') || $bib[k][2].has_key?('booktitle')
+           kname = 'booktitle'
+           kname = 'journal' if $bib[k][2].has_key?('journal')
+           $bib[k][2][kname] = req["changeto"] if cfrom.include?($bib[k][2][kname].strip)
+        end    
+     }
+     File.open($bibfile,'w') {|f| f.write(putentries($bib))}
+   end
+
+
+   journals = Hash.new
+   $bib.each_value {|b|
+     journals[b[2]['journal'].strip] = 1 if b[2].has_key?('journal')
+     journals[b[2]['booktitle'].strip] = 1 if b[2].has_key?('booktitle')
+   }
+   journals = journals.keys.sort
+%>
+<head>
+<title>BibOrg: <%= $bibfile %></title>
+<style type="text/css">
+a.alink {
+ padding: 2px;
+ text-decoration: none;
+ font-size:0.75em;
+ font-weight: bold;
+ color: #000000
+}
+a.alink:hover {
+ background-color: #fff
+}
+</style>
+
+<script type="text/javascript">
+function update()
+{
+   l = document.getElementsByName("jrnls[]");
+   t = document.getElementsByName("changeto");
+
+   for(i = 0; i < l.length;i++)
+     if(l[i].checked)
+       if(l[i].value.length > t[0].value.length)
+           t[0].value = l[i].value;
+}
+
+function clearsel()
+{
+   l = document.getElementsByName("jrnls[]");
+   for(i = 0; i < l.length;i++)
+         l[i].checked = false;
+   t = document.getElementsByName("changeto");
+   t[0].value = ''
+}
+</script>
+
+
+</head>
+
+<body style="background: #444; padding-top: 4px">
+<center>
+<form action="/journals.html" METHOD="POST">
+<table style="width:61em; border-spacing: 0px;">
+  <tr style="background: #888;">
+    <td style="text-align: left; font-size: 0.8em">
+      &nbsp;Change Selected To: <input name='changeto' value='' style="width:30em; border:0px">
+      <input type=submit value='Change'>
+      &nbsp;<a href="javascript:" onClick="clearsel()" class="alink">Clear</a>
+    </td>
+    <td style="text-align: right">
+      <a href="/" class="alink">Library</a>
+    </td>
+  </tr>
+</table>
+
+
+<table style="width:61em;">
+<%
+  clrs=['#ccc','#ddd'];
+  for i in 0..(journals.length-1)
+    bclr=clrs[i.modulo(2)]
+%>
+<tr style="background:<%=bclr%>;">
+<td style="width:1.5em; padding: 3px"><input onChange="update()" type="checkbox" name="jrnls[]" value="<%= journals[i] %>"></td>
+<td style="width: 58em; font-size: 1em; padding: 3px"><%= journals[i] %></td>
+</tr>
+<%
+  end
+%>
+</table>
+</form>
+</center>
+</body>
+</html>

data/lib/biborg/static/test.html

@@ -0,0 +1 @@
+adfadf

data/lib/biborg/webapp.rb

@@ -0,0 +1,27 @@
+module Biborg
+
+def webapp
+  return Rack::Builder.new {
+    use Rack::Static, :urls => ["/static"], :root => $basedir
+    map '/' do
+      run Proc.new {|env|
+        location = env["PATH_INFO"]
+        location = "/index.html" if location == '/'
+        if location == '/die'
+          Process.exit!(0)
+        end
+        if File.file? $basedir+"/rhtml"+location then
+          code = 200
+          header = {"Content-Type" => "text/html"}
+          req = Rack::Request.new(env)
+          data = ERB.new(File.read($basedir+"/rhtml"+location)).result(binding)
+          [code, header, data]
+        else
+          [404, {"Content-Type" => "text/plain"}, "File not found: "+location]
+        end
+      }
+    end
+  }
+end
+
+end

metadata

@@ -0,0 +1,118 @@
+--- !ruby/object:Gem::Specification 
+name: biborg
+version: !ruby/object:Gem::Version 
+  prerelease: true
+  segments: 
+  - 0
+  - 1
+  - a
+  version: 0.1.a
+platform: ruby
+authors: 
+- Ayan Chakrabarti
+autorequire: 
+bindir: bin
+cert_chain: []
+
+date: 2010-12-07 00:00:00 -05:00
+default_executable: 
+dependencies: 
+- !ruby/object:Gem::Dependency 
+  name: rack
+  prerelease: false
+  requirement: &id001 !ruby/object:Gem::Requirement 
+    requirements: 
+    - - "="
+      - !ruby/object:Gem::Version 
+        segments: 
+        - 1
+        - 1
+        - 0
+        version: 1.1.0
+  type: :runtime
+  version_requirements: *id001
+- !ruby/object:Gem::Dependency 
+  name: mongrel
+  prerelease: false
+  requirement: &id002 !ruby/object:Gem::Requirement 
+    requirements: 
+    - - ">="
+      - !ruby/object:Gem::Version 
+        segments: 
+        - 1
+        - 1
+        - 4
+        version: 1.1.4
+  type: :runtime
+  version_requirements: *id002
+- !ruby/object:Gem::Dependency 
+  name: ferret
+  prerelease: false
+  requirement: &id003 !ruby/object:Gem::Requirement 
+    requirements: 
+    - - ">="
+      - !ruby/object:Gem::Version 
+        segments: 
+        - 0
+        - 11
+        - 6
+        version: 0.11.6
+  type: :runtime
+  version_requirements: *id003
+description: .bib file browser and organizer.
+email: ayan.chakrabarti@gmail.com
+executables: 
+- biborg
+extensions: []
+
+extra_rdoc_files: []
+
+files: 
+- LICENSE
+- README
+- lib/biborg/static/test.html
+- lib/biborg/static/pencil.png
+- lib/biborg/parsebib.rb
+- lib/biborg/webapp.rb
+- lib/biborg/rhtml/journals.html
+- lib/biborg/rhtml/import.html
+- lib/biborg/rhtml/index.html
+- lib/biborg/rhtml/authors.html
+- lib/biborg/rhtml/edit.html
+- bin/biborg
+has_rdoc: true
+homepage: ""
+licenses: []
+
+post_install_message: 
+rdoc_options: []
+
+require_paths: 
+- lib
+required_ruby_version: !ruby/object:Gem::Requirement 
+  requirements: 
+  - - ">="
+    - !ruby/object:Gem::Version 
+      segments: 
+      - 1
+      - 8
+      - 1
+      version: 1.8.1
+required_rubygems_version: !ruby/object:Gem::Requirement 
+  requirements: 
+  - - ">"
+    - !ruby/object:Gem::Version 
+      segments: 
+      - 1
+      - 3
+      - 1
+      version: 1.3.1
+requirements: []
+
+rubyforge_project: 
+rubygems_version: 1.3.6
+signing_key: 
+specification_version: 3
+summary: .bib file browser and organizer.
+test_files: []
+