bettersam 0.1.0 → 0.1.1
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- checksums.yaml +4 -4
- data/lib/bettersam.rb +3 -2
- metadata +1 -1
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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|
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1
1
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---
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2
2
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SHA1:
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3
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-
metadata.gz:
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|
4
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-
data.tar.gz:
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|
3
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+
metadata.gz: adf55f7adc240db5cee1c5f188f3abd5798fbb98
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|
4
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+
data.tar.gz: 49f7b0e878392c32e49f18420777987fdcb252fc
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5
5
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SHA512:
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|
6
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-
metadata.gz:
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|
7
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-
data.tar.gz:
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|
6
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+
metadata.gz: 74cbfbabd15fca7d5e9d3568b2f2fcb7ddb363f2af9df94db793f877a98565272db38a60000bef79b7b4324a2850afefc111d063148eccefa822ddb4cb6905b3
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|
7
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+
data.tar.gz: b73440febce482e72fecc812e0afde3478743e128a9bf43f1f6842cd1e28fff1b70786b8fae13a9f60c46803b7ab4ce29e3e844d5d2880e82cab8c23f4407dc3
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data/lib/bettersam.rb
CHANGED
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@@ -19,8 +19,8 @@ class BetterSam
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|
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19
19
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20
20
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public
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21
21
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attr_accessor :name, :flag, :chrom, :pos, :mapq, :cigar, :mchrom, :mpos
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22
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-
attr_accessor :insert, :seq, :qual, :tags
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|
23
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-
attr_accessor :snp
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|
22
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+
attr_accessor :insert, :seq, :qual, :tags, :length
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23
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+
attr_accessor :snp
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24
24
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attr_reader :cigar_list
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|
25
25
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|
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26
26
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def initialize(line=nil)
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@@ -47,6 +47,7 @@ public
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|
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47
47
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@insert = int_or_raw(f[8])
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48
48
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@seq = f[9]
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49
49
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@qual = f[10]
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|
50
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+
@length = nil
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50
51
|
|
|
51
52
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@tags = {}
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|
52
53
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i = 11
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