bayon 0.1.0

data/COPYING

@@ -0,0 +1,339 @@
+		    GNU GENERAL PUBLIC LICENSE
+		       Version 2, June 1991
+
+ Copyright (C) 1989, 1991 Free Software Foundation, Inc.,
+ 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
+ Everyone is permitted to copy and distribute verbatim copies
+ of this license document, but changing it is not allowed.
+
+			    Preamble
+
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+
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+   TERMS AND CONDITIONS FOR COPYING, DISTRIBUTION AND MODIFICATION
+
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+			    NO WARRANTY
+
+  11. BECAUSE THE PROGRAM IS LICENSED FREE OF CHARGE, THERE IS NO WARRANTY
+FOR THE PROGRAM, TO THE EXTENT PERMITTED BY APPLICABLE LAW.  EXCEPT WHEN
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+
+	    How to Apply These Terms to Your New Programs
+
+  If you develop a new program, and you want it to be of the greatest
+possible use to the public, the best way to achieve this is to make it
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+
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+    Copyright (C) <year>  <name of author>
+
+    This program is free software; you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation; either version 2 of the License, or
+    (at your option) any later version.
+
+    This program is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License along
+    with this program; if not, write to the Free Software Foundation, Inc.,
+    51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+
+Also add information on how to contact you by electronic and paper mail.
+
+If the program is interactive, make it output a short notice like this
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+
+    Gnomovision version 69, Copyright (C) year name of author
+    Gnomovision comes with ABSOLUTELY NO WARRANTY; for details type `show w'.
+    This is free software, and you are welcome to redistribute it
+    under certain conditions; type `show c' for details.
+
+The hypothetical commands `show w' and `show c' should show the appropriate
+parts of the General Public License.  Of course, the commands you use may
+be called something other than `show w' and `show c'; they could even be
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+
+You should also get your employer (if you work as a programmer) or your
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+
+  Yoyodyne, Inc., hereby disclaims all copyright interest in the program
+  `Gnomovision' (which makes passes at compilers) written by James Hacker.
+
+  <signature of Ty Coon>, 1 April 1989
+  Ty Coon, President of Vice
+
+This General Public License does not permit incorporating your program into
+proprietary programs.  If your program is a subroutine library, you may
+consider it more useful to permit linking proprietary applications with the
+library.  If this is what you want to do, use the GNU Lesser General
+Public License instead of this License.

data/README

@@ -0,0 +1,51 @@
+= bayon/Ruby
+
+Copyright (c) 2009 SUGAWARA Genki <sgwr_dts@yahoo.co.jp>
+
+== Description
+
+Ruby bindings for bayon.
+
+see {bayon}[http://code.google.com/p/bayon/].
+
+== Install
+
+gem install bayon
+
+== Example
+
+    require 'bayon'
+    
+    docs = Bayon::Documents.new
+    docs.cluster_size_limit = 3
+    docs.add_document('Jacob'   , 'J-POP' => 10, 'J-R&B' => 6, 'Rock' => 4)
+    docs.add_document('Emma'    , 'Jazz' =>  8, 'Reggae'=> 9)
+    docs.add_document('Michael' , 'Classical music' => 4, 'World music' => 4)
+    docs.add_document('Isabella', 'Jazz' => 9, 'Metal' => 2, 'Reggae' => 6)
+    docs.add_document('Ethan'   , 'J-POP' => 4, 'Rock' => 3, 'Hip hop' => 3)
+    docs.add_document('Emily'   , 'Classical music' =>  8, 'Rock' => 1)
+    
+    result = docs.do_clustering
+    #=> [["Emma", "Isabella"], ["Jacob", "Ethan"], ["Michael", "Emily"]]
+    
+    result.each do |labels|
+      puts labels.join(', ')
+    end
+
+== Project Page
+
+http://rubyforge.org/projects/bayon
+
+== Source Code
+
+http://coderepos.org/share/browser/lang/ruby/ruby-bayon
+
+== License
+
+bayon/Ruby is distributed under the GNU General Public License.
+
+see COPYING.
+
+== Requirements
+
+* {bayon - simple and fast clustering tool}[http://code.google.com/p/bayon/]

data/ext/bayonext.cpp

@@ -0,0 +1,204 @@
+#include <string>
+#include <vector>
+#include <map>
+
+#include <bayon/cluster.h>
+
+#include "bayonext_internal.h"
+
+namespace {
+
+class CBayonDocument {
+  static VALUE rb_cBayonDocument;
+
+  bayon::Document* document_;
+
+  static void free(CBayonDocument *p) {
+    if (p->document_) {
+      delete p->document_;
+    }
+
+    delete p;
+  }
+
+  static VALUE alloc(VALUE klass) {
+    CBayonDocument *p;
+
+    p = new CBayonDocument;
+    p->document_ = 0;
+
+    return Data_Wrap_Struct(klass, 0, &free, p);
+  }
+
+  static VALUE initialize(VALUE self, VALUE v_docid) {
+    CBayonDocument *p;
+
+    long doc_id = NUM2LONG(v_docid);
+
+    Data_Get_Struct(self, CBayonDocument, p);
+    p->document_ = new bayon::Document(doc_id);
+
+    return Qnil;
+  }
+
+  static VALUE add_feature(VALUE self, VALUE v_key, VALUE v_value) {
+    CBayonDocument *p;
+
+    long key = NUM2LONG(v_key);
+    long value = NUM2LONG(v_value);
+
+    Data_Get_Struct(self, CBayonDocument, p);
+    p->document_->add_feature(key, value);
+
+    return Qnil;
+  }
+
+public:
+  static void check_type(VALUE obj) {
+    const char * const classname = rb_class2name(CLASS_OF(obj));
+
+    if (!rb_obj_is_instance_of(obj, rb_cBayonDocument)) {
+      rb_raise(rb_eTypeError, "wrong argument type %s (expected Bayon::Document)", classname); \
+    }
+  }
+
+  static bayon::Document* to_document(VALUE obj) {
+    CBayonDocument *p;
+
+    check_type(obj);
+    Data_Get_Struct(obj, CBayonDocument, p);
+
+    return p->document_;
+  }
+
+  static void init(VALUE &module) {
+    rb_cBayonDocument = rb_define_class_under(module, "Document", rb_cObject);
+
+    rb_define_alloc_func(rb_cBayonDocument, &alloc);
+    rb_define_method(rb_cBayonDocument, "initialize", __F(&initialize), 1);
+    rb_define_method(rb_cBayonDocument, "add_feature", __F(&add_feature), 2);
+  }
+};
+
+VALUE CBayonDocument::rb_cBayonDocument = Qnil;
+
+class CBayonAnalyzer {
+  bayon::Analyzer* analyzer_;
+
+  static void free(CBayonAnalyzer *p) {
+    if (p->analyzer_) {
+      delete p->analyzer_;
+    }
+
+    delete p;
+  }
+
+  static VALUE alloc(VALUE klass) {
+    CBayonAnalyzer *p;
+
+    p = new CBayonAnalyzer;
+    p->analyzer_ = 0;
+
+    return Data_Wrap_Struct(klass, 0, &free, p);
+  }
+
+  static VALUE initialize(VALUE self) {
+    CBayonAnalyzer *p;
+
+    Data_Get_Struct(self, CBayonAnalyzer, p);
+    p->analyzer_ = new bayon::Analyzer;
+
+    return Qnil;
+  }
+
+  static VALUE add_document(VALUE self, VALUE v_doc) {
+    CBayonAnalyzer *p;
+    bayon::Document *document;
+
+    document = CBayonDocument::to_document(v_doc);
+    Data_Get_Struct(self, CBayonAnalyzer, p);
+    p->analyzer_->add_document(*document);
+
+    return Qnil;
+  }
+
+  static VALUE set_cluster_size_limit(VALUE self, VALUE v_limit) {
+    CBayonAnalyzer *p;
+
+    size_t limit = NUM2LONG(v_limit);
+
+    Data_Get_Struct(self, CBayonAnalyzer, p);
+    p->analyzer_->set_cluster_size_limit(limit);
+
+    return Qnil;
+  }
+
+  static VALUE set_eval_limit(VALUE self, VALUE v_limit) {
+    CBayonAnalyzer *p;
+
+    double limit = NUM2DBL(v_limit);
+
+    Data_Get_Struct(self, CBayonAnalyzer, p);
+    p->analyzer_->set_eval_limit(limit);
+
+    return Qnil;
+  }
+
+  static VALUE do_clustering(VALUE self, VALUE v_method) {
+    CBayonAnalyzer *p;
+
+    Check_Type(v_method, T_STRING);
+
+    Data_Get_Struct(self, CBayonAnalyzer, p);
+    p->analyzer_->do_clustering(std::string(RSTRING_PTR(v_method)));
+
+    return Qnil;
+  }
+
+  static VALUE get_next_result(VALUE self) {
+    CBayonAnalyzer *p;
+    bayon::Cluster cluster;
+
+    Data_Get_Struct(self, CBayonAnalyzer, p);
+
+    if(p->analyzer_->get_next_result(cluster)) {
+      const std::vector<bayon::Document *> documents = cluster.documents();
+      VALUE docids = rb_ary_new2(documents.size());
+
+      for(std::vector<bayon::Document *>::const_iterator i = documents.begin(); i != documents.end(); i++) {
+        bayon::Document* doc = *i;
+        rb_ary_push(docids, LONG2NUM(doc->id()));
+      }
+
+      return docids;
+    } else {
+      return Qnil;
+    }
+  }
+
+public:
+  static void init(VALUE &module) {
+    VALUE rb_cBayonAnalyzer = rb_define_class_under(module, "Analyzer", rb_cObject);
+
+    rb_define_alloc_func(rb_cBayonAnalyzer, &alloc);
+    rb_define_method(rb_cBayonAnalyzer, "initialize", __F(&initialize), 0);
+    rb_define_method(rb_cBayonAnalyzer, "add_document", __F(&add_document), 1);
+    rb_define_method(rb_cBayonAnalyzer, "set_cluster_size_limit", __F(&set_cluster_size_limit), 1);
+    rb_define_method(rb_cBayonAnalyzer, "set_eval_limit", __F(&set_eval_limit), 1);
+    rb_define_method(rb_cBayonAnalyzer, "do_clustering", __F(&do_clustering), 1);
+    rb_define_method(rb_cBayonAnalyzer, "get_next_result", __F(&get_next_result), 0);
+
+    rb_define_const(rb_cBayonAnalyzer, "KMEANS", rb_str_new2("kmeans"));
+    rb_define_const(rb_cBayonAnalyzer, "REPEATED_BISECTION", rb_str_new2("rb"));
+  }
+};
+
+}
+
+void Init_bayonext() {
+  VALUE rb_mBayon;
+
+  rb_mBayon = rb_define_module("Bayon");
+  CBayonDocument::init(rb_mBayon);
+  CBayonAnalyzer::init(rb_mBayon);
+}

data/ext/bayonext_internal.h

@@ -0,0 +1,46 @@
+#ifndef __BAYONEXT_INTERNAL_H__
+#define __BAYONEXT_INTERNAL_H__
+
+#ifdef PACKAGE_NAME
+#undef PACKAGE_NAME
+#endif
+
+#ifdef PACKAGE_TARNAME
+#undef PACKAGE_TARNAME
+#endif
+
+#ifdef PACKAGE_VERSION
+#undef PACKAGE_VERSION
+#endif
+
+#ifdef PACKAGE_STRING
+#undef PACKAGE_STRING
+#endif
+
+#ifdef PACKAGE_BUGREPORT
+#undef PACKAGE_BUGREPORT
+#endif
+
+#include <ruby.h>
+
+#ifndef RSTRING_PTR
+#define RSTRING_PTR(s) (RSTRING(s)->ptr)
+#endif
+#ifndef RSTRING_LEN
+#define RSTRING_LEN(s) (RSTRING(s)->len)
+#endif
+
+#ifdef _WIN32
+#define __F(f) (reinterpret_cast<VALUE (__cdecl *)(...)>(f))
+#else
+#define __F(f) (reinterpret_cast<VALUE (*)(...)>(f))
+#endif
+
+extern "C" {
+#ifdef _WIN32
+__declspec(dllexport)
+#endif
+void Init_bayonext();
+}
+
+#endif // __BAYONEXT_INTERNAL_H__

data/ext/extconf.rb

@@ -0,0 +1,5 @@
+require 'mkmf'
+
+if have_library('stdc++') and have_library('bayon')
+  create_makefile('bayonext')
+end

data/lib/bayon.rb

@@ -0,0 +1,68 @@
+require 'bayonext'
+
+module Bayon
+  class Documents
+    def initialize
+      @documents = []
+      @cluster_size_limit = nil
+      @eval_limit = nil
+    end
+
+    def cluster_size_limit=(limit)
+      unless limit.kind_of?(Integer)
+        raise TypeError, "wrong argument type #{limit.class} (expected Integer)"
+      end
+
+      @cluster_size_limit = limit
+    end
+
+    def eval_limit=(limit)
+      unless limit.kind_of?(Numeric)
+        raise TypeError, "wrong argument type #{limit.class} (expected Numeric)"
+      end
+
+      @eval_limit = limit
+    end
+
+    def add_document(label, features)
+      unless features.kind_of?(Hash)
+        raise TypeError, "wrong argument type #{limit.class} (expected Hash)"
+      end
+
+      if (label_features = @documents.assoc(label))
+        label_features[1] = features
+      else
+        @documents << [label, features]
+      end
+    end
+
+    def do_clustering(method = Analyzer::REPEATED_BISECTION)
+      analyzer = Analyzer.new
+      analyzer.set_cluster_size_limit(@cluster_size_limit) if @cluster_size_limit
+      analyzer.set_eval_limit(@eval_limit) if @eval_limit
+
+      feature_set = []
+
+      @documents.each_with_index do |label_features, i|
+        doc = Document.new(i)
+
+        label_features[1].each do |feature, value|
+          feature_set << feature unless feature_set.include?(feature)
+          doc.add_feature(feature_set.index(feature), value)
+        end
+
+        analyzer.add_document(doc)
+      end
+
+      analyzer.do_clustering(method)
+
+      result = []
+
+      while (cluster = analyzer.get_next_result)
+        result << cluster.map {|doc_id| @documents[doc_id][0] }
+      end
+
+      return result
+    end
+  end
+end

metadata

@@ -0,0 +1,59 @@
+--- !ruby/object:Gem::Specification 
+name: bayon
+version: !ruby/object:Gem::Version 
+  version: 0.1.0
+platform: ruby
+authors: 
+- winebarrel
+autorequire: 
+bindir: bin
+cert_chain: []
+
+date: 2009-06-14 00:00:00 +09:00
+default_executable: 
+dependencies: []
+
+description: 
+email: sgwr_dts@yahoo.co.jp
+executables: []
+
+extensions: 
+- ext/extconf.rb
+extra_rdoc_files: 
+- README
+files: 
+- lib/bayon.rb
+- ext/bayonext.cpp
+- ext/bayonext_internal.h
+- ext/extconf.rb
+- README
+- COPYING
+has_rdoc: true
+homepage: http://bayon.rubyforge.org
+post_install_message: 
+rdoc_options: 
+- --title
+- bayon/Ruby - Ruby bindings for bayon.
+require_paths: 
+- lib
+required_ruby_version: !ruby/object:Gem::Requirement 
+  requirements: 
+  - - ">="
+    - !ruby/object:Gem::Version 
+      version: "0"
+  version: 
+required_rubygems_version: !ruby/object:Gem::Requirement 
+  requirements: 
+  - - ">="
+    - !ruby/object:Gem::Version 
+      version: "0"
+  version: 
+requirements: []
+
+rubyforge_project: bayon
+rubygems_version: 1.3.1
+signing_key: 
+specification_version: 2
+summary: Ruby bindings for bayon.
+test_files: []
+