basil 0.0.2 → 0.0.3
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- data/lib/basil/cli.rb +3 -1
- data/lib/basil/version.rb +1 -1
- data/readme.md +1 -1
- metadata +3 -3
data/lib/basil/cli.rb
CHANGED
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@@ -32,12 +32,14 @@ module Basil
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32
32
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records.each do |record|
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33
33
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34
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match = basil.recognize record.sequence
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35
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-
barcode,
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35
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+
barcode, sequence = match if match
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36
36
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unless match
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38
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barcode = 'unknown'
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39
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trimmed_sequence = record.sequence
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40
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end
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41
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+
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42
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+
trimmed_sequence = record.sequence[pretrim..-1]
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41
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new_record = Fasta.new :name => record.name, :sequence => trimmed_sequence
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43
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buffer.add_to File.join(out_dir, barcode + ".#{records_format}"), new_record
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data/lib/basil/version.rb
CHANGED
data/readme.md
CHANGED
metadata
CHANGED
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@@ -1,13 +1,13 @@
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1
1
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--- !ruby/object:Gem::Specification
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2
2
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name: basil
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3
3
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version: !ruby/object:Gem::Version
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4
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-
hash:
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4
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+
hash: 25
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5
5
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prerelease:
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6
6
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segments:
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7
7
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- 0
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8
8
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- 0
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9
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-
-
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10
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-
version: 0.0.
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9
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+
- 3
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10
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+
version: 0.0.3
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11
11
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platform: ruby
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12
12
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authors:
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- Austin G. Davis-Richardson
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