basil 0.0.2 → 0.0.3

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Files changed (4) hide show
  1. data/lib/basil/cli.rb +3 -1
  2. data/lib/basil/version.rb +1 -1
  3. data/readme.md +1 -1
  4. metadata +3 -3
data/lib/basil/cli.rb CHANGED
@@ -32,12 +32,14 @@ module Basil
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  records.each do |record|
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  match = basil.recognize record.sequence
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- barcode, trimmed_sequence = match if match
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+ barcode, sequence = match if match
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  unless match
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  barcode = 'unknown'
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  trimmed_sequence = record.sequence
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  end
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+
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+ trimmed_sequence = record.sequence[pretrim..-1]
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  new_record = Fasta.new :name => record.name, :sequence => trimmed_sequence
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  buffer.add_to File.join(out_dir, barcode + ".#{records_format}"), new_record
data/lib/basil/version.rb CHANGED
@@ -1,3 +1,3 @@
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  module Basil
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- VERSION = "0.0.2"
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+ VERSION = "0.0.3"
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  end
data/readme.md CHANGED
@@ -4,7 +4,7 @@ Yet another tool for splitting barcoded sequences. It had to be done.
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  ## Installation
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- gem install basil
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+ (sudo) gem install basil
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  ## Features
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metadata CHANGED
@@ -1,13 +1,13 @@
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  --- !ruby/object:Gem::Specification
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  name: basil
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  version: !ruby/object:Gem::Version
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- hash: 27
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+ hash: 25
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  prerelease:
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  segments:
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  - 0
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  - 0
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- - 2
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- version: 0.0.2
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+ - 3
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+ version: 0.0.3
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  platform: ruby
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  authors:
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  - Austin G. Davis-Richardson