bacterial-annotator 0.5.3 → 0.5.4
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/bacterial-annotator/sequence-synteny.rb +1 -12
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
---
|
2
2
|
SHA1:
|
3
|
-
metadata.gz:
|
4
|
-
data.tar.gz:
|
3
|
+
metadata.gz: 27f8cdf5e843b97030798ac29fc23bf1cc54bb5a
|
4
|
+
data.tar.gz: 77592401985aa2e22cb683c9561f63ef3d23d329
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: 15550bd245a460a16507132cf8cec2524b4724cffa909da983f46ce9531c957fbe5e22456973323fe1e2b0af2d0323333642c9c741fa5b614e482a2d0d3afb6a
|
7
|
+
data.tar.gz: 309de7383bbffe46cf68ab5436fc02b095e6069ec769e47b17a5c2e632fa7532e76e4ae399cbcfade0495b633f2fb07da9b77b8590693c9f63f5454e791cfa3a
|
@@ -251,7 +251,7 @@ class SequenceSynteny
|
|
251
251
|
end
|
252
252
|
end
|
253
253
|
|
254
|
-
|
254
|
+
prune_aln_hits @aln_hits
|
255
255
|
|
256
256
|
end # end of method
|
257
257
|
|
@@ -387,17 +387,6 @@ class SequenceSynteny
|
|
387
387
|
|
388
388
|
def prune_aln_hits aln_hits
|
389
389
|
|
390
|
-
# @aln_hits[key] = {
|
391
|
-
# pId: lA[2].to_f.round(2),
|
392
|
-
# evalue: lA[10],
|
393
|
-
# score: lA[11].to_f,
|
394
|
-
# hits: [hit],
|
395
|
-
# length: [lA[3].to_i],
|
396
|
-
# query_location: [[lA[6].to_i,lA[7].to_i]],
|
397
|
-
# subject_location: [[lA[8].to_i,lA[9].to_i]],
|
398
|
-
# feature: [feature]
|
399
|
-
# }
|
400
|
-
|
401
390
|
keys_to_delete = []
|
402
391
|
|
403
392
|
aln_hits.each do |key1,val1|
|
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: bacterial-annotator
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.5.
|
4
|
+
version: 0.5.4
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Maxime Deraspe
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date: 2017-06-
|
11
|
+
date: 2017-06-07 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: bio
|