aws-sdk-omics 1.23.0 → 1.24.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/CHANGELOG.md +5 -0
- data/VERSION +1 -1
- data/lib/aws-sdk-omics/client.rb +23 -6
- data/lib/aws-sdk-omics/client_api.rb +19 -1
- data/lib/aws-sdk-omics/types.rb +72 -7
- data/lib/aws-sdk-omics.rb +1 -1
- data/sig/client.rbs +5 -1
- data/sig/types.rbs +18 -1
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
---
|
2
2
|
SHA256:
|
3
|
-
metadata.gz:
|
4
|
-
data.tar.gz:
|
3
|
+
metadata.gz: 2bf8834ad3e0cda3cbc5f02233f65c56f9b91c944bc3e5493b3f5f6cd0b6eb84
|
4
|
+
data.tar.gz: 39dbffbb43ceac218a0249c3466c50edd405b2b2e6da1d85d8138c169103ad33
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: 8ac0e71d026029066020a1b4be991b331fb74a935ea776a5d727a0516bb5d347cae4ea77bcfd3842a2b5f0b8c9601471da13d6d9ac6fb0cdfc5414838e75b1bb
|
7
|
+
data.tar.gz: b8cdf39e60c32a4e7018ee262abb411374d2365028aa927a61466ac9435bbb6f567725ee2fe5aa0bc38caa1cb8b6ce13c05001f67ed55ad26edc6a5e86c4f0ee
|
data/CHANGELOG.md
CHANGED
@@ -1,6 +1,11 @@
|
|
1
1
|
Unreleased Changes
|
2
2
|
------------------
|
3
3
|
|
4
|
+
1.24.0 (2024-04-11)
|
5
|
+
------------------
|
6
|
+
|
7
|
+
* Feature - This release adds support for retrieval of S3 direct access metadata on sequence stores and read sets, and adds support for SHA256up and SHA512up HealthOmics ETags.
|
8
|
+
|
4
9
|
1.23.0 (2024-01-26)
|
5
10
|
------------------
|
6
11
|
|
data/VERSION
CHANGED
@@ -1 +1 @@
|
|
1
|
-
1.
|
1
|
+
1.24.0
|
data/lib/aws-sdk-omics/client.rb
CHANGED
@@ -568,7 +568,7 @@ module Aws::Omics
|
|
568
568
|
# {
|
569
569
|
# part_number: 1, # required
|
570
570
|
# part_source: "SOURCE1", # required, accepts SOURCE1, SOURCE2
|
571
|
-
# checksum: "
|
571
|
+
# checksum: "CompleteReadSetUploadPartListItemChecksumString", # required
|
572
572
|
# },
|
573
573
|
# ],
|
574
574
|
# })
|
@@ -993,6 +993,9 @@ module Aws::Omics
|
|
993
993
|
# An S3 location that is used to store files that have failed a direct
|
994
994
|
# upload.
|
995
995
|
#
|
996
|
+
# @option params [String] :e_tag_algorithm_family
|
997
|
+
# The ETag algorithm family to use for ingested read sets.
|
998
|
+
#
|
996
999
|
# @return [Types::CreateSequenceStoreResponse] Returns a {Seahorse::Client::Response response} object which responds to the following methods:
|
997
1000
|
#
|
998
1001
|
# * {Types::CreateSequenceStoreResponse#id #id} => String
|
@@ -1002,6 +1005,7 @@ module Aws::Omics
|
|
1002
1005
|
# * {Types::CreateSequenceStoreResponse#sse_config #sse_config} => Types::SseConfig
|
1003
1006
|
# * {Types::CreateSequenceStoreResponse#creation_time #creation_time} => Time
|
1004
1007
|
# * {Types::CreateSequenceStoreResponse#fallback_location #fallback_location} => String
|
1008
|
+
# * {Types::CreateSequenceStoreResponse#e_tag_algorithm_family #e_tag_algorithm_family} => String
|
1005
1009
|
#
|
1006
1010
|
# @example Request syntax with placeholder values
|
1007
1011
|
#
|
@@ -1017,6 +1021,7 @@ module Aws::Omics
|
|
1017
1021
|
# },
|
1018
1022
|
# client_token: "ClientToken",
|
1019
1023
|
# fallback_location: "S3Destination",
|
1024
|
+
# e_tag_algorithm_family: "MD5up", # accepts MD5up, SHA256up, SHA512up
|
1020
1025
|
# })
|
1021
1026
|
#
|
1022
1027
|
# @example Response structure
|
@@ -1029,6 +1034,7 @@ module Aws::Omics
|
|
1029
1034
|
# resp.sse_config.key_arn #=> String
|
1030
1035
|
# resp.creation_time #=> Time
|
1031
1036
|
# resp.fallback_location #=> String
|
1037
|
+
# resp.e_tag_algorithm_family #=> String, one of "MD5up", "SHA256up", "SHA512up"
|
1032
1038
|
#
|
1033
1039
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/CreateSequenceStore AWS API Documentation
|
1034
1040
|
#
|
@@ -1968,15 +1974,18 @@ module Aws::Omics
|
|
1968
1974
|
# resp.files.source1.total_parts #=> Integer
|
1969
1975
|
# resp.files.source1.part_size #=> Integer
|
1970
1976
|
# resp.files.source1.content_length #=> Integer
|
1977
|
+
# resp.files.source1.s3_access.s3_uri #=> String
|
1971
1978
|
# resp.files.source2.total_parts #=> Integer
|
1972
1979
|
# resp.files.source2.part_size #=> Integer
|
1973
1980
|
# resp.files.source2.content_length #=> Integer
|
1981
|
+
# resp.files.source2.s3_access.s3_uri #=> String
|
1974
1982
|
# resp.files.index.total_parts #=> Integer
|
1975
1983
|
# resp.files.index.part_size #=> Integer
|
1976
1984
|
# resp.files.index.content_length #=> Integer
|
1985
|
+
# resp.files.index.s3_access.s3_uri #=> String
|
1977
1986
|
# resp.status_message #=> String
|
1978
1987
|
# resp.creation_type #=> String, one of "IMPORT", "UPLOAD"
|
1979
|
-
# resp.etag.algorithm #=> String, one of "FASTQ_MD5up", "BAM_MD5up", "CRAM_MD5up"
|
1988
|
+
# resp.etag.algorithm #=> String, one of "FASTQ_MD5up", "BAM_MD5up", "CRAM_MD5up", "FASTQ_SHA256up", "BAM_SHA256up", "CRAM_SHA256up", "FASTQ_SHA512up", "BAM_SHA512up", "CRAM_SHA512up"
|
1980
1989
|
# resp.etag.source1 #=> String
|
1981
1990
|
# resp.etag.source2 #=> String
|
1982
1991
|
#
|
@@ -2133,9 +2142,11 @@ module Aws::Omics
|
|
2133
2142
|
# resp.files.source.total_parts #=> Integer
|
2134
2143
|
# resp.files.source.part_size #=> Integer
|
2135
2144
|
# resp.files.source.content_length #=> Integer
|
2145
|
+
# resp.files.source.s3_access.s3_uri #=> String
|
2136
2146
|
# resp.files.index.total_parts #=> Integer
|
2137
2147
|
# resp.files.index.part_size #=> Integer
|
2138
2148
|
# resp.files.index.content_length #=> Integer
|
2149
|
+
# resp.files.index.s3_access.s3_uri #=> String
|
2139
2150
|
#
|
2140
2151
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/GetReferenceMetadata AWS API Documentation
|
2141
2152
|
#
|
@@ -2402,6 +2413,8 @@ module Aws::Omics
|
|
2402
2413
|
# * {Types::GetSequenceStoreResponse#sse_config #sse_config} => Types::SseConfig
|
2403
2414
|
# * {Types::GetSequenceStoreResponse#creation_time #creation_time} => Time
|
2404
2415
|
# * {Types::GetSequenceStoreResponse#fallback_location #fallback_location} => String
|
2416
|
+
# * {Types::GetSequenceStoreResponse#s3_access #s3_access} => Types::SequenceStoreS3Access
|
2417
|
+
# * {Types::GetSequenceStoreResponse#e_tag_algorithm_family #e_tag_algorithm_family} => String
|
2405
2418
|
#
|
2406
2419
|
# @example Request syntax with placeholder values
|
2407
2420
|
#
|
@@ -2419,6 +2432,9 @@ module Aws::Omics
|
|
2419
2432
|
# resp.sse_config.key_arn #=> String
|
2420
2433
|
# resp.creation_time #=> Time
|
2421
2434
|
# resp.fallback_location #=> String
|
2435
|
+
# resp.s3_access.s3_uri #=> String
|
2436
|
+
# resp.s3_access.s3_access_point_arn #=> String
|
2437
|
+
# resp.e_tag_algorithm_family #=> String, one of "MD5up", "SHA256up", "SHA512up"
|
2422
2438
|
#
|
2423
2439
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/GetSequenceStore AWS API Documentation
|
2424
2440
|
#
|
@@ -2837,7 +2853,7 @@ module Aws::Omics
|
|
2837
2853
|
|
2838
2854
|
# Lists multipart read set uploads and for in progress uploads. Once the
|
2839
2855
|
# upload is completed, a read set is created and the upload will no
|
2840
|
-
# longer be returned in the
|
2856
|
+
# longer be returned in the response.
|
2841
2857
|
#
|
2842
2858
|
# @option params [required, String] :sequence_store_id
|
2843
2859
|
# The Sequence Store ID used for the multipart uploads.
|
@@ -3183,7 +3199,7 @@ module Aws::Omics
|
|
3183
3199
|
# resp.read_sets[0].creation_time #=> Time
|
3184
3200
|
# resp.read_sets[0].status_message #=> String
|
3185
3201
|
# resp.read_sets[0].creation_type #=> String, one of "IMPORT", "UPLOAD"
|
3186
|
-
# resp.read_sets[0].etag.algorithm #=> String, one of "FASTQ_MD5up", "BAM_MD5up", "CRAM_MD5up"
|
3202
|
+
# resp.read_sets[0].etag.algorithm #=> String, one of "FASTQ_MD5up", "BAM_MD5up", "CRAM_MD5up", "FASTQ_SHA256up", "BAM_SHA256up", "CRAM_SHA256up", "FASTQ_SHA512up", "BAM_SHA512up", "CRAM_SHA512up"
|
3187
3203
|
# resp.read_sets[0].etag.source1 #=> String
|
3188
3204
|
# resp.read_sets[0].etag.source2 #=> String
|
3189
3205
|
#
|
@@ -3568,6 +3584,7 @@ module Aws::Omics
|
|
3568
3584
|
# resp.sequence_stores[0].sse_config.key_arn #=> String
|
3569
3585
|
# resp.sequence_stores[0].creation_time #=> Time
|
3570
3586
|
# resp.sequence_stores[0].fallback_location #=> String
|
3587
|
+
# resp.sequence_stores[0].e_tag_algorithm_family #=> String, one of "MD5up", "SHA256up", "SHA512up"
|
3571
3588
|
#
|
3572
3589
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/ListSequenceStores AWS API Documentation
|
3573
3590
|
#
|
@@ -4179,7 +4196,7 @@ module Aws::Omics
|
|
4179
4196
|
# additional encoding or escaping.
|
4180
4197
|
#
|
4181
4198
|
# @option params [Integer] :storage_capacity
|
4182
|
-
# A storage capacity for the run in
|
4199
|
+
# A storage capacity for the run in gibibytes.
|
4183
4200
|
#
|
4184
4201
|
# @option params [String] :output_uri
|
4185
4202
|
# An output URI for the run.
|
@@ -4632,7 +4649,7 @@ module Aws::Omics
|
|
4632
4649
|
params: params,
|
4633
4650
|
config: config)
|
4634
4651
|
context[:gem_name] = 'aws-sdk-omics'
|
4635
|
-
context[:gem_version] = '1.
|
4652
|
+
context[:gem_version] = '1.24.0'
|
4636
4653
|
Seahorse::Client::Request.new(handlers, context)
|
4637
4654
|
end
|
4638
4655
|
|
@@ -56,6 +56,7 @@ module Aws::Omics
|
|
56
56
|
CompleteMultipartReadSetUploadResponse = Shapes::StructureShape.new(name: 'CompleteMultipartReadSetUploadResponse')
|
57
57
|
CompleteReadSetUploadPartList = Shapes::ListShape.new(name: 'CompleteReadSetUploadPartList')
|
58
58
|
CompleteReadSetUploadPartListItem = Shapes::StructureShape.new(name: 'CompleteReadSetUploadPartListItem')
|
59
|
+
CompleteReadSetUploadPartListItemChecksumString = Shapes::StringShape.new(name: 'CompleteReadSetUploadPartListItemChecksumString')
|
59
60
|
CompleteReadSetUploadPartListItemPartNumberInteger = Shapes::IntegerShape.new(name: 'CompleteReadSetUploadPartListItemPartNumberInteger')
|
60
61
|
CompletionTime = Shapes::TimestampShape.new(name: 'CompletionTime', timestampFormat: "iso8601")
|
61
62
|
ConflictException = Shapes::StructureShape.new(name: 'ConflictException')
|
@@ -104,6 +105,7 @@ module Aws::Omics
|
|
104
105
|
Description = Shapes::StringShape.new(name: 'Description')
|
105
106
|
ETag = Shapes::StructureShape.new(name: 'ETag')
|
106
107
|
ETagAlgorithm = Shapes::StringShape.new(name: 'ETagAlgorithm')
|
108
|
+
ETagAlgorithmFamily = Shapes::StringShape.new(name: 'ETagAlgorithmFamily')
|
107
109
|
Encoding = Shapes::StringShape.new(name: 'Encoding')
|
108
110
|
EncryptionType = Shapes::StringShape.new(name: 'EncryptionType')
|
109
111
|
EngineLogStream = Shapes::StringShape.new(name: 'EngineLogStream')
|
@@ -304,6 +306,7 @@ module Aws::Omics
|
|
304
306
|
ReadSetName = Shapes::StringShape.new(name: 'ReadSetName')
|
305
307
|
ReadSetPartSource = Shapes::StringShape.new(name: 'ReadSetPartSource')
|
306
308
|
ReadSetPartStreamingBlob = Shapes::BlobShape.new(name: 'ReadSetPartStreamingBlob', requiresLength: true, streaming: true)
|
309
|
+
ReadSetS3Access = Shapes::StructureShape.new(name: 'ReadSetS3Access')
|
307
310
|
ReadSetStatus = Shapes::StringShape.new(name: 'ReadSetStatus')
|
308
311
|
ReadSetStatusMessage = Shapes::StringShape.new(name: 'ReadSetStatusMessage')
|
309
312
|
ReadSetStreamingBlob = Shapes::BlobShape.new(name: 'ReadSetStreamingBlob', streaming: true)
|
@@ -380,6 +383,7 @@ module Aws::Omics
|
|
380
383
|
RunStatusMessage = Shapes::StringShape.new(name: 'RunStatusMessage')
|
381
384
|
RunTimestamp = Shapes::TimestampShape.new(name: 'RunTimestamp', timestampFormat: "iso8601")
|
382
385
|
RunUuid = Shapes::StringShape.new(name: 'RunUuid')
|
386
|
+
S3AccessPointArn = Shapes::StringShape.new(name: 'S3AccessPointArn')
|
383
387
|
S3Destination = Shapes::StringShape.new(name: 'S3Destination')
|
384
388
|
S3Uri = Shapes::StringShape.new(name: 'S3Uri')
|
385
389
|
SampleId = Shapes::StringShape.new(name: 'SampleId')
|
@@ -395,6 +399,7 @@ module Aws::Omics
|
|
395
399
|
SequenceStoreFilter = Shapes::StructureShape.new(name: 'SequenceStoreFilter')
|
396
400
|
SequenceStoreId = Shapes::StringShape.new(name: 'SequenceStoreId')
|
397
401
|
SequenceStoreName = Shapes::StringShape.new(name: 'SequenceStoreName')
|
402
|
+
SequenceStoreS3Access = Shapes::StructureShape.new(name: 'SequenceStoreS3Access')
|
398
403
|
ServiceQuotaExceededException = Shapes::StructureShape.new(name: 'ServiceQuotaExceededException')
|
399
404
|
ShareDetails = Shapes::StructureShape.new(name: 'ShareDetails')
|
400
405
|
ShareDetailsList = Shapes::ListShape.new(name: 'ShareDetailsList')
|
@@ -653,7 +658,7 @@ module Aws::Omics
|
|
653
658
|
|
654
659
|
CompleteReadSetUploadPartListItem.add_member(:part_number, Shapes::ShapeRef.new(shape: CompleteReadSetUploadPartListItemPartNumberInteger, required: true, location_name: "partNumber"))
|
655
660
|
CompleteReadSetUploadPartListItem.add_member(:part_source, Shapes::ShapeRef.new(shape: ReadSetPartSource, required: true, location_name: "partSource"))
|
656
|
-
CompleteReadSetUploadPartListItem.add_member(:checksum, Shapes::ShapeRef.new(shape:
|
661
|
+
CompleteReadSetUploadPartListItem.add_member(:checksum, Shapes::ShapeRef.new(shape: CompleteReadSetUploadPartListItemChecksumString, required: true, location_name: "checksum"))
|
657
662
|
CompleteReadSetUploadPartListItem.struct_class = Types::CompleteReadSetUploadPartListItem
|
658
663
|
|
659
664
|
ConflictException.add_member(:message, Shapes::ShapeRef.new(shape: String, required: true, location_name: "message"))
|
@@ -755,6 +760,7 @@ module Aws::Omics
|
|
755
760
|
CreateSequenceStoreRequest.add_member(:tags, Shapes::ShapeRef.new(shape: TagMap, location_name: "tags"))
|
756
761
|
CreateSequenceStoreRequest.add_member(:client_token, Shapes::ShapeRef.new(shape: ClientToken, location_name: "clientToken"))
|
757
762
|
CreateSequenceStoreRequest.add_member(:fallback_location, Shapes::ShapeRef.new(shape: S3Destination, location_name: "fallbackLocation"))
|
763
|
+
CreateSequenceStoreRequest.add_member(:e_tag_algorithm_family, Shapes::ShapeRef.new(shape: ETagAlgorithmFamily, location_name: "eTagAlgorithmFamily"))
|
758
764
|
CreateSequenceStoreRequest.struct_class = Types::CreateSequenceStoreRequest
|
759
765
|
|
760
766
|
CreateSequenceStoreResponse.add_member(:id, Shapes::ShapeRef.new(shape: SequenceStoreId, required: true, location_name: "id"))
|
@@ -764,6 +770,7 @@ module Aws::Omics
|
|
764
770
|
CreateSequenceStoreResponse.add_member(:sse_config, Shapes::ShapeRef.new(shape: SseConfig, location_name: "sseConfig"))
|
765
771
|
CreateSequenceStoreResponse.add_member(:creation_time, Shapes::ShapeRef.new(shape: SyntheticTimestamp_date_time, required: true, location_name: "creationTime"))
|
766
772
|
CreateSequenceStoreResponse.add_member(:fallback_location, Shapes::ShapeRef.new(shape: S3Destination, location_name: "fallbackLocation"))
|
773
|
+
CreateSequenceStoreResponse.add_member(:e_tag_algorithm_family, Shapes::ShapeRef.new(shape: ETagAlgorithmFamily, location_name: "eTagAlgorithmFamily"))
|
767
774
|
CreateSequenceStoreResponse.struct_class = Types::CreateSequenceStoreResponse
|
768
775
|
|
769
776
|
CreateShareRequest.add_member(:resource_arn, Shapes::ShapeRef.new(shape: String, required: true, location_name: "resourceArn"))
|
@@ -895,6 +902,7 @@ module Aws::Omics
|
|
895
902
|
FileInformation.add_member(:total_parts, Shapes::ShapeRef.new(shape: FileInformationTotalPartsInteger, location_name: "totalParts"))
|
896
903
|
FileInformation.add_member(:part_size, Shapes::ShapeRef.new(shape: FileInformationPartSizeLong, location_name: "partSize"))
|
897
904
|
FileInformation.add_member(:content_length, Shapes::ShapeRef.new(shape: FileInformationContentLengthLong, location_name: "contentLength"))
|
905
|
+
FileInformation.add_member(:s3_access, Shapes::ShapeRef.new(shape: ReadSetS3Access, location_name: "s3Access"))
|
898
906
|
FileInformation.struct_class = Types::FileInformation
|
899
907
|
|
900
908
|
Filter.add_member(:resource_arns, Shapes::ShapeRef.new(shape: ArnList, location_name: "resourceArns"))
|
@@ -1174,6 +1182,8 @@ module Aws::Omics
|
|
1174
1182
|
GetSequenceStoreResponse.add_member(:sse_config, Shapes::ShapeRef.new(shape: SseConfig, location_name: "sseConfig"))
|
1175
1183
|
GetSequenceStoreResponse.add_member(:creation_time, Shapes::ShapeRef.new(shape: SyntheticTimestamp_date_time, required: true, location_name: "creationTime"))
|
1176
1184
|
GetSequenceStoreResponse.add_member(:fallback_location, Shapes::ShapeRef.new(shape: S3Destination, location_name: "fallbackLocation"))
|
1185
|
+
GetSequenceStoreResponse.add_member(:s3_access, Shapes::ShapeRef.new(shape: SequenceStoreS3Access, location_name: "s3Access"))
|
1186
|
+
GetSequenceStoreResponse.add_member(:e_tag_algorithm_family, Shapes::ShapeRef.new(shape: ETagAlgorithmFamily, location_name: "eTagAlgorithmFamily"))
|
1177
1187
|
GetSequenceStoreResponse.struct_class = Types::GetSequenceStoreResponse
|
1178
1188
|
|
1179
1189
|
GetShareRequest.add_member(:share_id, Shapes::ShapeRef.new(shape: String, required: true, location: "uri", location_name: "shareId"))
|
@@ -1603,6 +1613,9 @@ module Aws::Omics
|
|
1603
1613
|
ReadSetListItem.add_member(:etag, Shapes::ShapeRef.new(shape: ETag, location_name: "etag"))
|
1604
1614
|
ReadSetListItem.struct_class = Types::ReadSetListItem
|
1605
1615
|
|
1616
|
+
ReadSetS3Access.add_member(:s3_uri, Shapes::ShapeRef.new(shape: S3Uri, location_name: "s3Uri"))
|
1617
|
+
ReadSetS3Access.struct_class = Types::ReadSetS3Access
|
1618
|
+
|
1606
1619
|
ReadSetUploadPartList.member = Shapes::ShapeRef.new(shape: ReadSetUploadPartListItem)
|
1607
1620
|
|
1608
1621
|
ReadSetUploadPartListFilter.add_member(:created_after, Shapes::ShapeRef.new(shape: SyntheticTimestamp_date_time, location_name: "createdAfter"))
|
@@ -1718,6 +1731,7 @@ module Aws::Omics
|
|
1718
1731
|
SequenceStoreDetail.add_member(:sse_config, Shapes::ShapeRef.new(shape: SseConfig, location_name: "sseConfig"))
|
1719
1732
|
SequenceStoreDetail.add_member(:creation_time, Shapes::ShapeRef.new(shape: SyntheticTimestamp_date_time, required: true, location_name: "creationTime"))
|
1720
1733
|
SequenceStoreDetail.add_member(:fallback_location, Shapes::ShapeRef.new(shape: S3Destination, location_name: "fallbackLocation"))
|
1734
|
+
SequenceStoreDetail.add_member(:e_tag_algorithm_family, Shapes::ShapeRef.new(shape: ETagAlgorithmFamily, location_name: "eTagAlgorithmFamily"))
|
1721
1735
|
SequenceStoreDetail.struct_class = Types::SequenceStoreDetail
|
1722
1736
|
|
1723
1737
|
SequenceStoreDetailList.member = Shapes::ShapeRef.new(shape: SequenceStoreDetail)
|
@@ -1727,6 +1741,10 @@ module Aws::Omics
|
|
1727
1741
|
SequenceStoreFilter.add_member(:created_before, Shapes::ShapeRef.new(shape: SyntheticTimestamp_date_time, location_name: "createdBefore"))
|
1728
1742
|
SequenceStoreFilter.struct_class = Types::SequenceStoreFilter
|
1729
1743
|
|
1744
|
+
SequenceStoreS3Access.add_member(:s3_uri, Shapes::ShapeRef.new(shape: S3Uri, location_name: "s3Uri"))
|
1745
|
+
SequenceStoreS3Access.add_member(:s3_access_point_arn, Shapes::ShapeRef.new(shape: S3AccessPointArn, location_name: "s3AccessPointArn"))
|
1746
|
+
SequenceStoreS3Access.struct_class = Types::SequenceStoreS3Access
|
1747
|
+
|
1730
1748
|
ServiceQuotaExceededException.add_member(:message, Shapes::ShapeRef.new(shape: String, required: true, location_name: "message"))
|
1731
1749
|
ServiceQuotaExceededException.struct_class = Types::ServiceQuotaExceededException
|
1732
1750
|
|
data/lib/aws-sdk-omics/types.rb
CHANGED
@@ -766,7 +766,7 @@ module Aws::Omics
|
|
766
766
|
# @return [String]
|
767
767
|
#
|
768
768
|
# @!attribute [rw] upload_id
|
769
|
-
#
|
769
|
+
# The ID for the initiated multipart upload.
|
770
770
|
# @return [String]
|
771
771
|
#
|
772
772
|
# @!attribute [rw] source_file_type
|
@@ -987,6 +987,10 @@ module Aws::Omics
|
|
987
987
|
# upload.
|
988
988
|
# @return [String]
|
989
989
|
#
|
990
|
+
# @!attribute [rw] e_tag_algorithm_family
|
991
|
+
# The ETag algorithm family to use for ingested read sets.
|
992
|
+
# @return [String]
|
993
|
+
#
|
990
994
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/CreateSequenceStoreRequest AWS API Documentation
|
991
995
|
#
|
992
996
|
class CreateSequenceStoreRequest < Struct.new(
|
@@ -995,7 +999,8 @@ module Aws::Omics
|
|
995
999
|
:sse_config,
|
996
1000
|
:tags,
|
997
1001
|
:client_token,
|
998
|
-
:fallback_location
|
1002
|
+
:fallback_location,
|
1003
|
+
:e_tag_algorithm_family)
|
999
1004
|
SENSITIVE = []
|
1000
1005
|
include Aws::Structure
|
1001
1006
|
end
|
@@ -1029,6 +1034,10 @@ module Aws::Omics
|
|
1029
1034
|
# upload.
|
1030
1035
|
# @return [String]
|
1031
1036
|
#
|
1037
|
+
# @!attribute [rw] e_tag_algorithm_family
|
1038
|
+
# The algorithm family of the ETag.
|
1039
|
+
# @return [String]
|
1040
|
+
#
|
1032
1041
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/CreateSequenceStoreResponse AWS API Documentation
|
1033
1042
|
#
|
1034
1043
|
class CreateSequenceStoreResponse < Struct.new(
|
@@ -1038,7 +1047,8 @@ module Aws::Omics
|
|
1038
1047
|
:description,
|
1039
1048
|
:sse_config,
|
1040
1049
|
:creation_time,
|
1041
|
-
:fallback_location
|
1050
|
+
:fallback_location,
|
1051
|
+
:e_tag_algorithm_family)
|
1042
1052
|
SENSITIVE = []
|
1043
1053
|
include Aws::Structure
|
1044
1054
|
end
|
@@ -1593,12 +1603,17 @@ module Aws::Omics
|
|
1593
1603
|
# The file's content length.
|
1594
1604
|
# @return [Integer]
|
1595
1605
|
#
|
1606
|
+
# @!attribute [rw] s3_access
|
1607
|
+
# The S3 URI metadata of a sequence store.
|
1608
|
+
# @return [Types::ReadSetS3Access]
|
1609
|
+
#
|
1596
1610
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/FileInformation AWS API Documentation
|
1597
1611
|
#
|
1598
1612
|
class FileInformation < Struct.new(
|
1599
1613
|
:total_parts,
|
1600
1614
|
:part_size,
|
1601
|
-
:content_length
|
1615
|
+
:content_length,
|
1616
|
+
:s3_access)
|
1602
1617
|
SENSITIVE = []
|
1603
1618
|
include Aws::Structure
|
1604
1619
|
end
|
@@ -2849,6 +2864,15 @@ module Aws::Omics
|
|
2849
2864
|
# upload.
|
2850
2865
|
# @return [String]
|
2851
2866
|
#
|
2867
|
+
# @!attribute [rw] s3_access
|
2868
|
+
# The S3 metadata of a sequence store, including the ARN and S3 URI of
|
2869
|
+
# the S3 bucket.
|
2870
|
+
# @return [Types::SequenceStoreS3Access]
|
2871
|
+
#
|
2872
|
+
# @!attribute [rw] e_tag_algorithm_family
|
2873
|
+
# The algorithm family of the ETag.
|
2874
|
+
# @return [String]
|
2875
|
+
#
|
2852
2876
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/GetSequenceStoreResponse AWS API Documentation
|
2853
2877
|
#
|
2854
2878
|
class GetSequenceStoreResponse < Struct.new(
|
@@ -2858,7 +2882,9 @@ module Aws::Omics
|
|
2858
2882
|
:description,
|
2859
2883
|
:sse_config,
|
2860
2884
|
:creation_time,
|
2861
|
-
:fallback_location
|
2885
|
+
:fallback_location,
|
2886
|
+
:s3_access,
|
2887
|
+
:e_tag_algorithm_family)
|
2862
2888
|
SENSITIVE = []
|
2863
2889
|
include Aws::Structure
|
2864
2890
|
end
|
@@ -4744,6 +4770,20 @@ module Aws::Omics
|
|
4744
4770
|
include Aws::Structure
|
4745
4771
|
end
|
4746
4772
|
|
4773
|
+
# The S3 URI for each read set file.
|
4774
|
+
#
|
4775
|
+
# @!attribute [rw] s3_uri
|
4776
|
+
# The S3 URI for each read set file.
|
4777
|
+
# @return [String]
|
4778
|
+
#
|
4779
|
+
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/ReadSetS3Access AWS API Documentation
|
4780
|
+
#
|
4781
|
+
class ReadSetS3Access < Struct.new(
|
4782
|
+
:s3_uri)
|
4783
|
+
SENSITIVE = []
|
4784
|
+
include Aws::Structure
|
4785
|
+
end
|
4786
|
+
|
4747
4787
|
# Filter settings that select for read set upload parts of interest.
|
4748
4788
|
#
|
4749
4789
|
# @!attribute [rw] created_after
|
@@ -5206,6 +5246,10 @@ module Aws::Omics
|
|
5206
5246
|
# upload.
|
5207
5247
|
# @return [String]
|
5208
5248
|
#
|
5249
|
+
# @!attribute [rw] e_tag_algorithm_family
|
5250
|
+
# The algorithm family of the ETag.
|
5251
|
+
# @return [String]
|
5252
|
+
#
|
5209
5253
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/SequenceStoreDetail AWS API Documentation
|
5210
5254
|
#
|
5211
5255
|
class SequenceStoreDetail < Struct.new(
|
@@ -5215,7 +5259,8 @@ module Aws::Omics
|
|
5215
5259
|
:description,
|
5216
5260
|
:sse_config,
|
5217
5261
|
:creation_time,
|
5218
|
-
:fallback_location
|
5262
|
+
:fallback_location,
|
5263
|
+
:e_tag_algorithm_family)
|
5219
5264
|
SENSITIVE = []
|
5220
5265
|
include Aws::Structure
|
5221
5266
|
end
|
@@ -5244,6 +5289,26 @@ module Aws::Omics
|
|
5244
5289
|
include Aws::Structure
|
5245
5290
|
end
|
5246
5291
|
|
5292
|
+
# The S3 access metadata of the sequence store.
|
5293
|
+
#
|
5294
|
+
# @!attribute [rw] s3_uri
|
5295
|
+
# The S3 URI of the sequence store.
|
5296
|
+
# @return [String]
|
5297
|
+
#
|
5298
|
+
# @!attribute [rw] s3_access_point_arn
|
5299
|
+
# This is ARN of the access point associated with the S3 bucket
|
5300
|
+
# storing read sets.
|
5301
|
+
# @return [String]
|
5302
|
+
#
|
5303
|
+
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/SequenceStoreS3Access AWS API Documentation
|
5304
|
+
#
|
5305
|
+
class SequenceStoreS3Access < Struct.new(
|
5306
|
+
:s3_uri,
|
5307
|
+
:s3_access_point_arn)
|
5308
|
+
SENSITIVE = []
|
5309
|
+
include Aws::Structure
|
5310
|
+
end
|
5311
|
+
|
5247
5312
|
# The request exceeds a service quota.
|
5248
5313
|
#
|
5249
5314
|
# @!attribute [rw] message
|
@@ -5771,7 +5836,7 @@ module Aws::Omics
|
|
5771
5836
|
# @return [Hash,Array,String,Numeric,Boolean]
|
5772
5837
|
#
|
5773
5838
|
# @!attribute [rw] storage_capacity
|
5774
|
-
# A storage capacity for the run in
|
5839
|
+
# A storage capacity for the run in gibibytes.
|
5775
5840
|
# @return [Integer]
|
5776
5841
|
#
|
5777
5842
|
# @!attribute [rw] output_uri
|
data/lib/aws-sdk-omics.rb
CHANGED
data/sig/client.rbs
CHANGED
@@ -288,6 +288,7 @@ module Aws
|
|
288
288
|
def sse_config: () -> Types::SseConfig
|
289
289
|
def creation_time: () -> ::Time
|
290
290
|
def fallback_location: () -> ::String
|
291
|
+
def e_tag_algorithm_family: () -> ("MD5up" | "SHA256up" | "SHA512up")
|
291
292
|
end
|
292
293
|
# https://docs.aws.amazon.com/sdk-for-ruby/v3/api/Aws/Omics/Client.html#create_sequence_store-instance_method
|
293
294
|
def create_sequence_store: (
|
@@ -299,7 +300,8 @@ module Aws
|
|
299
300
|
},
|
300
301
|
?tags: Hash[::String, ::String],
|
301
302
|
?client_token: ::String,
|
302
|
-
?fallback_location: ::String
|
303
|
+
?fallback_location: ::String,
|
304
|
+
?e_tag_algorithm_family: ("MD5up" | "SHA256up" | "SHA512up")
|
303
305
|
) -> _CreateSequenceStoreResponseSuccess
|
304
306
|
| (Hash[Symbol, untyped] params, ?Hash[Symbol, untyped] options) -> _CreateSequenceStoreResponseSuccess
|
305
307
|
|
@@ -773,6 +775,8 @@ module Aws
|
|
773
775
|
def sse_config: () -> Types::SseConfig
|
774
776
|
def creation_time: () -> ::Time
|
775
777
|
def fallback_location: () -> ::String
|
778
|
+
def s3_access: () -> Types::SequenceStoreS3Access
|
779
|
+
def e_tag_algorithm_family: () -> ("MD5up" | "SHA256up" | "SHA512up")
|
776
780
|
end
|
777
781
|
# https://docs.aws.amazon.com/sdk-for-ruby/v3/api/Aws/Omics/Client.html#get_sequence_store-instance_method
|
778
782
|
def get_sequence_store: (
|
data/sig/types.rbs
CHANGED
@@ -284,6 +284,7 @@ module Aws::Omics
|
|
284
284
|
attr_accessor tags: ::Hash[::String, ::String]
|
285
285
|
attr_accessor client_token: ::String
|
286
286
|
attr_accessor fallback_location: ::String
|
287
|
+
attr_accessor e_tag_algorithm_family: ("MD5up" | "SHA256up" | "SHA512up")
|
287
288
|
SENSITIVE: []
|
288
289
|
end
|
289
290
|
|
@@ -295,6 +296,7 @@ module Aws::Omics
|
|
295
296
|
attr_accessor sse_config: Types::SseConfig
|
296
297
|
attr_accessor creation_time: ::Time
|
297
298
|
attr_accessor fallback_location: ::String
|
299
|
+
attr_accessor e_tag_algorithm_family: ("MD5up" | "SHA256up" | "SHA512up")
|
298
300
|
SENSITIVE: []
|
299
301
|
end
|
300
302
|
|
@@ -438,7 +440,7 @@ module Aws::Omics
|
|
438
440
|
end
|
439
441
|
|
440
442
|
class ETag
|
441
|
-
attr_accessor algorithm: ("FASTQ_MD5up" | "BAM_MD5up" | "CRAM_MD5up")
|
443
|
+
attr_accessor algorithm: ("FASTQ_MD5up" | "BAM_MD5up" | "CRAM_MD5up" | "FASTQ_SHA256up" | "BAM_SHA256up" | "CRAM_SHA256up" | "FASTQ_SHA512up" | "BAM_SHA512up" | "CRAM_SHA512up")
|
442
444
|
attr_accessor source1: ::String
|
443
445
|
attr_accessor source2: ::String
|
444
446
|
SENSITIVE: []
|
@@ -477,6 +479,7 @@ module Aws::Omics
|
|
477
479
|
attr_accessor total_parts: ::Integer
|
478
480
|
attr_accessor part_size: ::Integer
|
479
481
|
attr_accessor content_length: ::Integer
|
482
|
+
attr_accessor s3_access: Types::ReadSetS3Access
|
480
483
|
SENSITIVE: []
|
481
484
|
end
|
482
485
|
|
@@ -821,6 +824,8 @@ module Aws::Omics
|
|
821
824
|
attr_accessor sse_config: Types::SseConfig
|
822
825
|
attr_accessor creation_time: ::Time
|
823
826
|
attr_accessor fallback_location: ::String
|
827
|
+
attr_accessor s3_access: Types::SequenceStoreS3Access
|
828
|
+
attr_accessor e_tag_algorithm_family: ("MD5up" | "SHA256up" | "SHA512up")
|
824
829
|
SENSITIVE: []
|
825
830
|
end
|
826
831
|
|
@@ -1367,6 +1372,11 @@ module Aws::Omics
|
|
1367
1372
|
SENSITIVE: []
|
1368
1373
|
end
|
1369
1374
|
|
1375
|
+
class ReadSetS3Access
|
1376
|
+
attr_accessor s3_uri: ::String
|
1377
|
+
SENSITIVE: []
|
1378
|
+
end
|
1379
|
+
|
1370
1380
|
class ReadSetUploadPartListFilter
|
1371
1381
|
attr_accessor created_after: ::Time
|
1372
1382
|
attr_accessor created_before: ::Time
|
@@ -1496,6 +1506,7 @@ module Aws::Omics
|
|
1496
1506
|
attr_accessor sse_config: Types::SseConfig
|
1497
1507
|
attr_accessor creation_time: ::Time
|
1498
1508
|
attr_accessor fallback_location: ::String
|
1509
|
+
attr_accessor e_tag_algorithm_family: ("MD5up" | "SHA256up" | "SHA512up")
|
1499
1510
|
SENSITIVE: []
|
1500
1511
|
end
|
1501
1512
|
|
@@ -1506,6 +1517,12 @@ module Aws::Omics
|
|
1506
1517
|
SENSITIVE: []
|
1507
1518
|
end
|
1508
1519
|
|
1520
|
+
class SequenceStoreS3Access
|
1521
|
+
attr_accessor s3_uri: ::String
|
1522
|
+
attr_accessor s3_access_point_arn: ::String
|
1523
|
+
SENSITIVE: []
|
1524
|
+
end
|
1525
|
+
|
1509
1526
|
class ServiceQuotaExceededException
|
1510
1527
|
attr_accessor message: ::String
|
1511
1528
|
SENSITIVE: []
|
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: aws-sdk-omics
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 1.
|
4
|
+
version: 1.24.0
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Amazon Web Services
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date: 2024-
|
11
|
+
date: 2024-04-11 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: aws-sdk-core
|