aws-sdk-omics 1.23.0 → 1.24.0
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- checksums.yaml +4 -4
- data/CHANGELOG.md +5 -0
- data/VERSION +1 -1
- data/lib/aws-sdk-omics/client.rb +23 -6
- data/lib/aws-sdk-omics/client_api.rb +19 -1
- data/lib/aws-sdk-omics/types.rb +72 -7
- data/lib/aws-sdk-omics.rb +1 -1
- data/sig/client.rbs +5 -1
- data/sig/types.rbs +18 -1
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
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---
|
2
2
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SHA256:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 2bf8834ad3e0cda3cbc5f02233f65c56f9b91c944bc3e5493b3f5f6cd0b6eb84
|
4
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+
data.tar.gz: 39dbffbb43ceac218a0249c3466c50edd405b2b2e6da1d85d8138c169103ad33
|
5
5
|
SHA512:
|
6
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-
metadata.gz:
|
7
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-
data.tar.gz:
|
6
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+
metadata.gz: 8ac0e71d026029066020a1b4be991b331fb74a935ea776a5d727a0516bb5d347cae4ea77bcfd3842a2b5f0b8c9601471da13d6d9ac6fb0cdfc5414838e75b1bb
|
7
|
+
data.tar.gz: b8cdf39e60c32a4e7018ee262abb411374d2365028aa927a61466ac9435bbb6f567725ee2fe5aa0bc38caa1cb8b6ce13c05001f67ed55ad26edc6a5e86c4f0ee
|
data/CHANGELOG.md
CHANGED
@@ -1,6 +1,11 @@
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1
1
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Unreleased Changes
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2
2
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------------------
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3
3
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4
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+
1.24.0 (2024-04-11)
|
5
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+
------------------
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6
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+
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7
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+
* Feature - This release adds support for retrieval of S3 direct access metadata on sequence stores and read sets, and adds support for SHA256up and SHA512up HealthOmics ETags.
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8
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+
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4
9
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1.23.0 (2024-01-26)
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5
10
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------------------
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6
11
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data/VERSION
CHANGED
@@ -1 +1 @@
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1
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-
1.
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1
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+
1.24.0
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data/lib/aws-sdk-omics/client.rb
CHANGED
@@ -568,7 +568,7 @@ module Aws::Omics
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|
568
568
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# {
|
569
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# part_number: 1, # required
|
570
570
|
# part_source: "SOURCE1", # required, accepts SOURCE1, SOURCE2
|
571
|
-
# checksum: "
|
571
|
+
# checksum: "CompleteReadSetUploadPartListItemChecksumString", # required
|
572
572
|
# },
|
573
573
|
# ],
|
574
574
|
# })
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@@ -993,6 +993,9 @@ module Aws::Omics
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993
993
|
# An S3 location that is used to store files that have failed a direct
|
994
994
|
# upload.
|
995
995
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#
|
996
|
+
# @option params [String] :e_tag_algorithm_family
|
997
|
+
# The ETag algorithm family to use for ingested read sets.
|
998
|
+
#
|
996
999
|
# @return [Types::CreateSequenceStoreResponse] Returns a {Seahorse::Client::Response response} object which responds to the following methods:
|
997
1000
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#
|
998
1001
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# * {Types::CreateSequenceStoreResponse#id #id} => String
|
@@ -1002,6 +1005,7 @@ module Aws::Omics
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|
1002
1005
|
# * {Types::CreateSequenceStoreResponse#sse_config #sse_config} => Types::SseConfig
|
1003
1006
|
# * {Types::CreateSequenceStoreResponse#creation_time #creation_time} => Time
|
1004
1007
|
# * {Types::CreateSequenceStoreResponse#fallback_location #fallback_location} => String
|
1008
|
+
# * {Types::CreateSequenceStoreResponse#e_tag_algorithm_family #e_tag_algorithm_family} => String
|
1005
1009
|
#
|
1006
1010
|
# @example Request syntax with placeholder values
|
1007
1011
|
#
|
@@ -1017,6 +1021,7 @@ module Aws::Omics
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|
1017
1021
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# },
|
1018
1022
|
# client_token: "ClientToken",
|
1019
1023
|
# fallback_location: "S3Destination",
|
1024
|
+
# e_tag_algorithm_family: "MD5up", # accepts MD5up, SHA256up, SHA512up
|
1020
1025
|
# })
|
1021
1026
|
#
|
1022
1027
|
# @example Response structure
|
@@ -1029,6 +1034,7 @@ module Aws::Omics
|
|
1029
1034
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# resp.sse_config.key_arn #=> String
|
1030
1035
|
# resp.creation_time #=> Time
|
1031
1036
|
# resp.fallback_location #=> String
|
1037
|
+
# resp.e_tag_algorithm_family #=> String, one of "MD5up", "SHA256up", "SHA512up"
|
1032
1038
|
#
|
1033
1039
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# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/CreateSequenceStore AWS API Documentation
|
1034
1040
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#
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@@ -1968,15 +1974,18 @@ module Aws::Omics
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1968
1974
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# resp.files.source1.total_parts #=> Integer
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1969
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# resp.files.source1.part_size #=> Integer
|
1970
1976
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# resp.files.source1.content_length #=> Integer
|
1977
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+
# resp.files.source1.s3_access.s3_uri #=> String
|
1971
1978
|
# resp.files.source2.total_parts #=> Integer
|
1972
1979
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# resp.files.source2.part_size #=> Integer
|
1973
1980
|
# resp.files.source2.content_length #=> Integer
|
1981
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+
# resp.files.source2.s3_access.s3_uri #=> String
|
1974
1982
|
# resp.files.index.total_parts #=> Integer
|
1975
1983
|
# resp.files.index.part_size #=> Integer
|
1976
1984
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# resp.files.index.content_length #=> Integer
|
1985
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+
# resp.files.index.s3_access.s3_uri #=> String
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# resp.status_message #=> String
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# resp.creation_type #=> String, one of "IMPORT", "UPLOAD"
|
1979
|
-
# resp.etag.algorithm #=> String, one of "FASTQ_MD5up", "BAM_MD5up", "CRAM_MD5up"
|
1988
|
+
# resp.etag.algorithm #=> String, one of "FASTQ_MD5up", "BAM_MD5up", "CRAM_MD5up", "FASTQ_SHA256up", "BAM_SHA256up", "CRAM_SHA256up", "FASTQ_SHA512up", "BAM_SHA512up", "CRAM_SHA512up"
|
1980
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# resp.etag.source1 #=> String
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1981
1990
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# resp.etag.source2 #=> String
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1982
1991
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#
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@@ -2133,9 +2142,11 @@ module Aws::Omics
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2133
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# resp.files.source.total_parts #=> Integer
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2134
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|
# resp.files.source.part_size #=> Integer
|
2135
2144
|
# resp.files.source.content_length #=> Integer
|
2145
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+
# resp.files.source.s3_access.s3_uri #=> String
|
2136
2146
|
# resp.files.index.total_parts #=> Integer
|
2137
2147
|
# resp.files.index.part_size #=> Integer
|
2138
2148
|
# resp.files.index.content_length #=> Integer
|
2149
|
+
# resp.files.index.s3_access.s3_uri #=> String
|
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#
|
2140
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# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/GetReferenceMetadata AWS API Documentation
|
2141
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|
#
|
@@ -2402,6 +2413,8 @@ module Aws::Omics
|
|
2402
2413
|
# * {Types::GetSequenceStoreResponse#sse_config #sse_config} => Types::SseConfig
|
2403
2414
|
# * {Types::GetSequenceStoreResponse#creation_time #creation_time} => Time
|
2404
2415
|
# * {Types::GetSequenceStoreResponse#fallback_location #fallback_location} => String
|
2416
|
+
# * {Types::GetSequenceStoreResponse#s3_access #s3_access} => Types::SequenceStoreS3Access
|
2417
|
+
# * {Types::GetSequenceStoreResponse#e_tag_algorithm_family #e_tag_algorithm_family} => String
|
2405
2418
|
#
|
2406
2419
|
# @example Request syntax with placeholder values
|
2407
2420
|
#
|
@@ -2419,6 +2432,9 @@ module Aws::Omics
|
|
2419
2432
|
# resp.sse_config.key_arn #=> String
|
2420
2433
|
# resp.creation_time #=> Time
|
2421
2434
|
# resp.fallback_location #=> String
|
2435
|
+
# resp.s3_access.s3_uri #=> String
|
2436
|
+
# resp.s3_access.s3_access_point_arn #=> String
|
2437
|
+
# resp.e_tag_algorithm_family #=> String, one of "MD5up", "SHA256up", "SHA512up"
|
2422
2438
|
#
|
2423
2439
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/GetSequenceStore AWS API Documentation
|
2424
2440
|
#
|
@@ -2837,7 +2853,7 @@ module Aws::Omics
|
|
2837
2853
|
|
2838
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|
# Lists multipart read set uploads and for in progress uploads. Once the
|
2839
2855
|
# upload is completed, a read set is created and the upload will no
|
2840
|
-
# longer be returned in the
|
2856
|
+
# longer be returned in the response.
|
2841
2857
|
#
|
2842
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|
# @option params [required, String] :sequence_store_id
|
2843
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|
# The Sequence Store ID used for the multipart uploads.
|
@@ -3183,7 +3199,7 @@ module Aws::Omics
|
|
3183
3199
|
# resp.read_sets[0].creation_time #=> Time
|
3184
3200
|
# resp.read_sets[0].status_message #=> String
|
3185
3201
|
# resp.read_sets[0].creation_type #=> String, one of "IMPORT", "UPLOAD"
|
3186
|
-
# resp.read_sets[0].etag.algorithm #=> String, one of "FASTQ_MD5up", "BAM_MD5up", "CRAM_MD5up"
|
3202
|
+
# resp.read_sets[0].etag.algorithm #=> String, one of "FASTQ_MD5up", "BAM_MD5up", "CRAM_MD5up", "FASTQ_SHA256up", "BAM_SHA256up", "CRAM_SHA256up", "FASTQ_SHA512up", "BAM_SHA512up", "CRAM_SHA512up"
|
3187
3203
|
# resp.read_sets[0].etag.source1 #=> String
|
3188
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|
# resp.read_sets[0].etag.source2 #=> String
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3189
3205
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#
|
@@ -3568,6 +3584,7 @@ module Aws::Omics
|
|
3568
3584
|
# resp.sequence_stores[0].sse_config.key_arn #=> String
|
3569
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|
# resp.sequence_stores[0].creation_time #=> Time
|
3570
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|
# resp.sequence_stores[0].fallback_location #=> String
|
3587
|
+
# resp.sequence_stores[0].e_tag_algorithm_family #=> String, one of "MD5up", "SHA256up", "SHA512up"
|
3571
3588
|
#
|
3572
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# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/ListSequenceStores AWS API Documentation
|
3573
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#
|
@@ -4179,7 +4196,7 @@ module Aws::Omics
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4179
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# additional encoding or escaping.
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4180
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#
|
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# @option params [Integer] :storage_capacity
|
4182
|
-
# A storage capacity for the run in
|
4199
|
+
# A storage capacity for the run in gibibytes.
|
4183
4200
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#
|
4184
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# @option params [String] :output_uri
|
4185
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# An output URI for the run.
|
@@ -4632,7 +4649,7 @@ module Aws::Omics
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4632
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params: params,
|
4633
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|
config: config)
|
4634
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|
context[:gem_name] = 'aws-sdk-omics'
|
4635
|
-
context[:gem_version] = '1.
|
4652
|
+
context[:gem_version] = '1.24.0'
|
4636
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Seahorse::Client::Request.new(handlers, context)
|
4637
4654
|
end
|
4638
4655
|
|
@@ -56,6 +56,7 @@ module Aws::Omics
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|
56
56
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CompleteMultipartReadSetUploadResponse = Shapes::StructureShape.new(name: 'CompleteMultipartReadSetUploadResponse')
|
57
57
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CompleteReadSetUploadPartList = Shapes::ListShape.new(name: 'CompleteReadSetUploadPartList')
|
58
58
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CompleteReadSetUploadPartListItem = Shapes::StructureShape.new(name: 'CompleteReadSetUploadPartListItem')
|
59
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+
CompleteReadSetUploadPartListItemChecksumString = Shapes::StringShape.new(name: 'CompleteReadSetUploadPartListItemChecksumString')
|
59
60
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CompleteReadSetUploadPartListItemPartNumberInteger = Shapes::IntegerShape.new(name: 'CompleteReadSetUploadPartListItemPartNumberInteger')
|
60
61
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CompletionTime = Shapes::TimestampShape.new(name: 'CompletionTime', timestampFormat: "iso8601")
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62
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ConflictException = Shapes::StructureShape.new(name: 'ConflictException')
|
@@ -104,6 +105,7 @@ module Aws::Omics
|
|
104
105
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Description = Shapes::StringShape.new(name: 'Description')
|
105
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ETag = Shapes::StructureShape.new(name: 'ETag')
|
106
107
|
ETagAlgorithm = Shapes::StringShape.new(name: 'ETagAlgorithm')
|
108
|
+
ETagAlgorithmFamily = Shapes::StringShape.new(name: 'ETagAlgorithmFamily')
|
107
109
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Encoding = Shapes::StringShape.new(name: 'Encoding')
|
108
110
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EncryptionType = Shapes::StringShape.new(name: 'EncryptionType')
|
109
111
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EngineLogStream = Shapes::StringShape.new(name: 'EngineLogStream')
|
@@ -304,6 +306,7 @@ module Aws::Omics
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304
306
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ReadSetName = Shapes::StringShape.new(name: 'ReadSetName')
|
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ReadSetPartSource = Shapes::StringShape.new(name: 'ReadSetPartSource')
|
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ReadSetPartStreamingBlob = Shapes::BlobShape.new(name: 'ReadSetPartStreamingBlob', requiresLength: true, streaming: true)
|
309
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+
ReadSetS3Access = Shapes::StructureShape.new(name: 'ReadSetS3Access')
|
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ReadSetStatus = Shapes::StringShape.new(name: 'ReadSetStatus')
|
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ReadSetStatusMessage = Shapes::StringShape.new(name: 'ReadSetStatusMessage')
|
309
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ReadSetStreamingBlob = Shapes::BlobShape.new(name: 'ReadSetStreamingBlob', streaming: true)
|
@@ -380,6 +383,7 @@ module Aws::Omics
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|
380
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RunStatusMessage = Shapes::StringShape.new(name: 'RunStatusMessage')
|
381
384
|
RunTimestamp = Shapes::TimestampShape.new(name: 'RunTimestamp', timestampFormat: "iso8601")
|
382
385
|
RunUuid = Shapes::StringShape.new(name: 'RunUuid')
|
386
|
+
S3AccessPointArn = Shapes::StringShape.new(name: 'S3AccessPointArn')
|
383
387
|
S3Destination = Shapes::StringShape.new(name: 'S3Destination')
|
384
388
|
S3Uri = Shapes::StringShape.new(name: 'S3Uri')
|
385
389
|
SampleId = Shapes::StringShape.new(name: 'SampleId')
|
@@ -395,6 +399,7 @@ module Aws::Omics
|
|
395
399
|
SequenceStoreFilter = Shapes::StructureShape.new(name: 'SequenceStoreFilter')
|
396
400
|
SequenceStoreId = Shapes::StringShape.new(name: 'SequenceStoreId')
|
397
401
|
SequenceStoreName = Shapes::StringShape.new(name: 'SequenceStoreName')
|
402
|
+
SequenceStoreS3Access = Shapes::StructureShape.new(name: 'SequenceStoreS3Access')
|
398
403
|
ServiceQuotaExceededException = Shapes::StructureShape.new(name: 'ServiceQuotaExceededException')
|
399
404
|
ShareDetails = Shapes::StructureShape.new(name: 'ShareDetails')
|
400
405
|
ShareDetailsList = Shapes::ListShape.new(name: 'ShareDetailsList')
|
@@ -653,7 +658,7 @@ module Aws::Omics
|
|
653
658
|
|
654
659
|
CompleteReadSetUploadPartListItem.add_member(:part_number, Shapes::ShapeRef.new(shape: CompleteReadSetUploadPartListItemPartNumberInteger, required: true, location_name: "partNumber"))
|
655
660
|
CompleteReadSetUploadPartListItem.add_member(:part_source, Shapes::ShapeRef.new(shape: ReadSetPartSource, required: true, location_name: "partSource"))
|
656
|
-
CompleteReadSetUploadPartListItem.add_member(:checksum, Shapes::ShapeRef.new(shape:
|
661
|
+
CompleteReadSetUploadPartListItem.add_member(:checksum, Shapes::ShapeRef.new(shape: CompleteReadSetUploadPartListItemChecksumString, required: true, location_name: "checksum"))
|
657
662
|
CompleteReadSetUploadPartListItem.struct_class = Types::CompleteReadSetUploadPartListItem
|
658
663
|
|
659
664
|
ConflictException.add_member(:message, Shapes::ShapeRef.new(shape: String, required: true, location_name: "message"))
|
@@ -755,6 +760,7 @@ module Aws::Omics
|
|
755
760
|
CreateSequenceStoreRequest.add_member(:tags, Shapes::ShapeRef.new(shape: TagMap, location_name: "tags"))
|
756
761
|
CreateSequenceStoreRequest.add_member(:client_token, Shapes::ShapeRef.new(shape: ClientToken, location_name: "clientToken"))
|
757
762
|
CreateSequenceStoreRequest.add_member(:fallback_location, Shapes::ShapeRef.new(shape: S3Destination, location_name: "fallbackLocation"))
|
763
|
+
CreateSequenceStoreRequest.add_member(:e_tag_algorithm_family, Shapes::ShapeRef.new(shape: ETagAlgorithmFamily, location_name: "eTagAlgorithmFamily"))
|
758
764
|
CreateSequenceStoreRequest.struct_class = Types::CreateSequenceStoreRequest
|
759
765
|
|
760
766
|
CreateSequenceStoreResponse.add_member(:id, Shapes::ShapeRef.new(shape: SequenceStoreId, required: true, location_name: "id"))
|
@@ -764,6 +770,7 @@ module Aws::Omics
|
|
764
770
|
CreateSequenceStoreResponse.add_member(:sse_config, Shapes::ShapeRef.new(shape: SseConfig, location_name: "sseConfig"))
|
765
771
|
CreateSequenceStoreResponse.add_member(:creation_time, Shapes::ShapeRef.new(shape: SyntheticTimestamp_date_time, required: true, location_name: "creationTime"))
|
766
772
|
CreateSequenceStoreResponse.add_member(:fallback_location, Shapes::ShapeRef.new(shape: S3Destination, location_name: "fallbackLocation"))
|
773
|
+
CreateSequenceStoreResponse.add_member(:e_tag_algorithm_family, Shapes::ShapeRef.new(shape: ETagAlgorithmFamily, location_name: "eTagAlgorithmFamily"))
|
767
774
|
CreateSequenceStoreResponse.struct_class = Types::CreateSequenceStoreResponse
|
768
775
|
|
769
776
|
CreateShareRequest.add_member(:resource_arn, Shapes::ShapeRef.new(shape: String, required: true, location_name: "resourceArn"))
|
@@ -895,6 +902,7 @@ module Aws::Omics
|
|
895
902
|
FileInformation.add_member(:total_parts, Shapes::ShapeRef.new(shape: FileInformationTotalPartsInteger, location_name: "totalParts"))
|
896
903
|
FileInformation.add_member(:part_size, Shapes::ShapeRef.new(shape: FileInformationPartSizeLong, location_name: "partSize"))
|
897
904
|
FileInformation.add_member(:content_length, Shapes::ShapeRef.new(shape: FileInformationContentLengthLong, location_name: "contentLength"))
|
905
|
+
FileInformation.add_member(:s3_access, Shapes::ShapeRef.new(shape: ReadSetS3Access, location_name: "s3Access"))
|
898
906
|
FileInformation.struct_class = Types::FileInformation
|
899
907
|
|
900
908
|
Filter.add_member(:resource_arns, Shapes::ShapeRef.new(shape: ArnList, location_name: "resourceArns"))
|
@@ -1174,6 +1182,8 @@ module Aws::Omics
|
|
1174
1182
|
GetSequenceStoreResponse.add_member(:sse_config, Shapes::ShapeRef.new(shape: SseConfig, location_name: "sseConfig"))
|
1175
1183
|
GetSequenceStoreResponse.add_member(:creation_time, Shapes::ShapeRef.new(shape: SyntheticTimestamp_date_time, required: true, location_name: "creationTime"))
|
1176
1184
|
GetSequenceStoreResponse.add_member(:fallback_location, Shapes::ShapeRef.new(shape: S3Destination, location_name: "fallbackLocation"))
|
1185
|
+
GetSequenceStoreResponse.add_member(:s3_access, Shapes::ShapeRef.new(shape: SequenceStoreS3Access, location_name: "s3Access"))
|
1186
|
+
GetSequenceStoreResponse.add_member(:e_tag_algorithm_family, Shapes::ShapeRef.new(shape: ETagAlgorithmFamily, location_name: "eTagAlgorithmFamily"))
|
1177
1187
|
GetSequenceStoreResponse.struct_class = Types::GetSequenceStoreResponse
|
1178
1188
|
|
1179
1189
|
GetShareRequest.add_member(:share_id, Shapes::ShapeRef.new(shape: String, required: true, location: "uri", location_name: "shareId"))
|
@@ -1603,6 +1613,9 @@ module Aws::Omics
|
|
1603
1613
|
ReadSetListItem.add_member(:etag, Shapes::ShapeRef.new(shape: ETag, location_name: "etag"))
|
1604
1614
|
ReadSetListItem.struct_class = Types::ReadSetListItem
|
1605
1615
|
|
1616
|
+
ReadSetS3Access.add_member(:s3_uri, Shapes::ShapeRef.new(shape: S3Uri, location_name: "s3Uri"))
|
1617
|
+
ReadSetS3Access.struct_class = Types::ReadSetS3Access
|
1618
|
+
|
1606
1619
|
ReadSetUploadPartList.member = Shapes::ShapeRef.new(shape: ReadSetUploadPartListItem)
|
1607
1620
|
|
1608
1621
|
ReadSetUploadPartListFilter.add_member(:created_after, Shapes::ShapeRef.new(shape: SyntheticTimestamp_date_time, location_name: "createdAfter"))
|
@@ -1718,6 +1731,7 @@ module Aws::Omics
|
|
1718
1731
|
SequenceStoreDetail.add_member(:sse_config, Shapes::ShapeRef.new(shape: SseConfig, location_name: "sseConfig"))
|
1719
1732
|
SequenceStoreDetail.add_member(:creation_time, Shapes::ShapeRef.new(shape: SyntheticTimestamp_date_time, required: true, location_name: "creationTime"))
|
1720
1733
|
SequenceStoreDetail.add_member(:fallback_location, Shapes::ShapeRef.new(shape: S3Destination, location_name: "fallbackLocation"))
|
1734
|
+
SequenceStoreDetail.add_member(:e_tag_algorithm_family, Shapes::ShapeRef.new(shape: ETagAlgorithmFamily, location_name: "eTagAlgorithmFamily"))
|
1721
1735
|
SequenceStoreDetail.struct_class = Types::SequenceStoreDetail
|
1722
1736
|
|
1723
1737
|
SequenceStoreDetailList.member = Shapes::ShapeRef.new(shape: SequenceStoreDetail)
|
@@ -1727,6 +1741,10 @@ module Aws::Omics
|
|
1727
1741
|
SequenceStoreFilter.add_member(:created_before, Shapes::ShapeRef.new(shape: SyntheticTimestamp_date_time, location_name: "createdBefore"))
|
1728
1742
|
SequenceStoreFilter.struct_class = Types::SequenceStoreFilter
|
1729
1743
|
|
1744
|
+
SequenceStoreS3Access.add_member(:s3_uri, Shapes::ShapeRef.new(shape: S3Uri, location_name: "s3Uri"))
|
1745
|
+
SequenceStoreS3Access.add_member(:s3_access_point_arn, Shapes::ShapeRef.new(shape: S3AccessPointArn, location_name: "s3AccessPointArn"))
|
1746
|
+
SequenceStoreS3Access.struct_class = Types::SequenceStoreS3Access
|
1747
|
+
|
1730
1748
|
ServiceQuotaExceededException.add_member(:message, Shapes::ShapeRef.new(shape: String, required: true, location_name: "message"))
|
1731
1749
|
ServiceQuotaExceededException.struct_class = Types::ServiceQuotaExceededException
|
1732
1750
|
|
data/lib/aws-sdk-omics/types.rb
CHANGED
@@ -766,7 +766,7 @@ module Aws::Omics
|
|
766
766
|
# @return [String]
|
767
767
|
#
|
768
768
|
# @!attribute [rw] upload_id
|
769
|
-
#
|
769
|
+
# The ID for the initiated multipart upload.
|
770
770
|
# @return [String]
|
771
771
|
#
|
772
772
|
# @!attribute [rw] source_file_type
|
@@ -987,6 +987,10 @@ module Aws::Omics
|
|
987
987
|
# upload.
|
988
988
|
# @return [String]
|
989
989
|
#
|
990
|
+
# @!attribute [rw] e_tag_algorithm_family
|
991
|
+
# The ETag algorithm family to use for ingested read sets.
|
992
|
+
# @return [String]
|
993
|
+
#
|
990
994
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/CreateSequenceStoreRequest AWS API Documentation
|
991
995
|
#
|
992
996
|
class CreateSequenceStoreRequest < Struct.new(
|
@@ -995,7 +999,8 @@ module Aws::Omics
|
|
995
999
|
:sse_config,
|
996
1000
|
:tags,
|
997
1001
|
:client_token,
|
998
|
-
:fallback_location
|
1002
|
+
:fallback_location,
|
1003
|
+
:e_tag_algorithm_family)
|
999
1004
|
SENSITIVE = []
|
1000
1005
|
include Aws::Structure
|
1001
1006
|
end
|
@@ -1029,6 +1034,10 @@ module Aws::Omics
|
|
1029
1034
|
# upload.
|
1030
1035
|
# @return [String]
|
1031
1036
|
#
|
1037
|
+
# @!attribute [rw] e_tag_algorithm_family
|
1038
|
+
# The algorithm family of the ETag.
|
1039
|
+
# @return [String]
|
1040
|
+
#
|
1032
1041
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/CreateSequenceStoreResponse AWS API Documentation
|
1033
1042
|
#
|
1034
1043
|
class CreateSequenceStoreResponse < Struct.new(
|
@@ -1038,7 +1047,8 @@ module Aws::Omics
|
|
1038
1047
|
:description,
|
1039
1048
|
:sse_config,
|
1040
1049
|
:creation_time,
|
1041
|
-
:fallback_location
|
1050
|
+
:fallback_location,
|
1051
|
+
:e_tag_algorithm_family)
|
1042
1052
|
SENSITIVE = []
|
1043
1053
|
include Aws::Structure
|
1044
1054
|
end
|
@@ -1593,12 +1603,17 @@ module Aws::Omics
|
|
1593
1603
|
# The file's content length.
|
1594
1604
|
# @return [Integer]
|
1595
1605
|
#
|
1606
|
+
# @!attribute [rw] s3_access
|
1607
|
+
# The S3 URI metadata of a sequence store.
|
1608
|
+
# @return [Types::ReadSetS3Access]
|
1609
|
+
#
|
1596
1610
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/FileInformation AWS API Documentation
|
1597
1611
|
#
|
1598
1612
|
class FileInformation < Struct.new(
|
1599
1613
|
:total_parts,
|
1600
1614
|
:part_size,
|
1601
|
-
:content_length
|
1615
|
+
:content_length,
|
1616
|
+
:s3_access)
|
1602
1617
|
SENSITIVE = []
|
1603
1618
|
include Aws::Structure
|
1604
1619
|
end
|
@@ -2849,6 +2864,15 @@ module Aws::Omics
|
|
2849
2864
|
# upload.
|
2850
2865
|
# @return [String]
|
2851
2866
|
#
|
2867
|
+
# @!attribute [rw] s3_access
|
2868
|
+
# The S3 metadata of a sequence store, including the ARN and S3 URI of
|
2869
|
+
# the S3 bucket.
|
2870
|
+
# @return [Types::SequenceStoreS3Access]
|
2871
|
+
#
|
2872
|
+
# @!attribute [rw] e_tag_algorithm_family
|
2873
|
+
# The algorithm family of the ETag.
|
2874
|
+
# @return [String]
|
2875
|
+
#
|
2852
2876
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/GetSequenceStoreResponse AWS API Documentation
|
2853
2877
|
#
|
2854
2878
|
class GetSequenceStoreResponse < Struct.new(
|
@@ -2858,7 +2882,9 @@ module Aws::Omics
|
|
2858
2882
|
:description,
|
2859
2883
|
:sse_config,
|
2860
2884
|
:creation_time,
|
2861
|
-
:fallback_location
|
2885
|
+
:fallback_location,
|
2886
|
+
:s3_access,
|
2887
|
+
:e_tag_algorithm_family)
|
2862
2888
|
SENSITIVE = []
|
2863
2889
|
include Aws::Structure
|
2864
2890
|
end
|
@@ -4744,6 +4770,20 @@ module Aws::Omics
|
|
4744
4770
|
include Aws::Structure
|
4745
4771
|
end
|
4746
4772
|
|
4773
|
+
# The S3 URI for each read set file.
|
4774
|
+
#
|
4775
|
+
# @!attribute [rw] s3_uri
|
4776
|
+
# The S3 URI for each read set file.
|
4777
|
+
# @return [String]
|
4778
|
+
#
|
4779
|
+
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/ReadSetS3Access AWS API Documentation
|
4780
|
+
#
|
4781
|
+
class ReadSetS3Access < Struct.new(
|
4782
|
+
:s3_uri)
|
4783
|
+
SENSITIVE = []
|
4784
|
+
include Aws::Structure
|
4785
|
+
end
|
4786
|
+
|
4747
4787
|
# Filter settings that select for read set upload parts of interest.
|
4748
4788
|
#
|
4749
4789
|
# @!attribute [rw] created_after
|
@@ -5206,6 +5246,10 @@ module Aws::Omics
|
|
5206
5246
|
# upload.
|
5207
5247
|
# @return [String]
|
5208
5248
|
#
|
5249
|
+
# @!attribute [rw] e_tag_algorithm_family
|
5250
|
+
# The algorithm family of the ETag.
|
5251
|
+
# @return [String]
|
5252
|
+
#
|
5209
5253
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/SequenceStoreDetail AWS API Documentation
|
5210
5254
|
#
|
5211
5255
|
class SequenceStoreDetail < Struct.new(
|
@@ -5215,7 +5259,8 @@ module Aws::Omics
|
|
5215
5259
|
:description,
|
5216
5260
|
:sse_config,
|
5217
5261
|
:creation_time,
|
5218
|
-
:fallback_location
|
5262
|
+
:fallback_location,
|
5263
|
+
:e_tag_algorithm_family)
|
5219
5264
|
SENSITIVE = []
|
5220
5265
|
include Aws::Structure
|
5221
5266
|
end
|
@@ -5244,6 +5289,26 @@ module Aws::Omics
|
|
5244
5289
|
include Aws::Structure
|
5245
5290
|
end
|
5246
5291
|
|
5292
|
+
# The S3 access metadata of the sequence store.
|
5293
|
+
#
|
5294
|
+
# @!attribute [rw] s3_uri
|
5295
|
+
# The S3 URI of the sequence store.
|
5296
|
+
# @return [String]
|
5297
|
+
#
|
5298
|
+
# @!attribute [rw] s3_access_point_arn
|
5299
|
+
# This is ARN of the access point associated with the S3 bucket
|
5300
|
+
# storing read sets.
|
5301
|
+
# @return [String]
|
5302
|
+
#
|
5303
|
+
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/SequenceStoreS3Access AWS API Documentation
|
5304
|
+
#
|
5305
|
+
class SequenceStoreS3Access < Struct.new(
|
5306
|
+
:s3_uri,
|
5307
|
+
:s3_access_point_arn)
|
5308
|
+
SENSITIVE = []
|
5309
|
+
include Aws::Structure
|
5310
|
+
end
|
5311
|
+
|
5247
5312
|
# The request exceeds a service quota.
|
5248
5313
|
#
|
5249
5314
|
# @!attribute [rw] message
|
@@ -5771,7 +5836,7 @@ module Aws::Omics
|
|
5771
5836
|
# @return [Hash,Array,String,Numeric,Boolean]
|
5772
5837
|
#
|
5773
5838
|
# @!attribute [rw] storage_capacity
|
5774
|
-
# A storage capacity for the run in
|
5839
|
+
# A storage capacity for the run in gibibytes.
|
5775
5840
|
# @return [Integer]
|
5776
5841
|
#
|
5777
5842
|
# @!attribute [rw] output_uri
|
data/lib/aws-sdk-omics.rb
CHANGED
data/sig/client.rbs
CHANGED
@@ -288,6 +288,7 @@ module Aws
|
|
288
288
|
def sse_config: () -> Types::SseConfig
|
289
289
|
def creation_time: () -> ::Time
|
290
290
|
def fallback_location: () -> ::String
|
291
|
+
def e_tag_algorithm_family: () -> ("MD5up" | "SHA256up" | "SHA512up")
|
291
292
|
end
|
292
293
|
# https://docs.aws.amazon.com/sdk-for-ruby/v3/api/Aws/Omics/Client.html#create_sequence_store-instance_method
|
293
294
|
def create_sequence_store: (
|
@@ -299,7 +300,8 @@ module Aws
|
|
299
300
|
},
|
300
301
|
?tags: Hash[::String, ::String],
|
301
302
|
?client_token: ::String,
|
302
|
-
?fallback_location: ::String
|
303
|
+
?fallback_location: ::String,
|
304
|
+
?e_tag_algorithm_family: ("MD5up" | "SHA256up" | "SHA512up")
|
303
305
|
) -> _CreateSequenceStoreResponseSuccess
|
304
306
|
| (Hash[Symbol, untyped] params, ?Hash[Symbol, untyped] options) -> _CreateSequenceStoreResponseSuccess
|
305
307
|
|
@@ -773,6 +775,8 @@ module Aws
|
|
773
775
|
def sse_config: () -> Types::SseConfig
|
774
776
|
def creation_time: () -> ::Time
|
775
777
|
def fallback_location: () -> ::String
|
778
|
+
def s3_access: () -> Types::SequenceStoreS3Access
|
779
|
+
def e_tag_algorithm_family: () -> ("MD5up" | "SHA256up" | "SHA512up")
|
776
780
|
end
|
777
781
|
# https://docs.aws.amazon.com/sdk-for-ruby/v3/api/Aws/Omics/Client.html#get_sequence_store-instance_method
|
778
782
|
def get_sequence_store: (
|
data/sig/types.rbs
CHANGED
@@ -284,6 +284,7 @@ module Aws::Omics
|
|
284
284
|
attr_accessor tags: ::Hash[::String, ::String]
|
285
285
|
attr_accessor client_token: ::String
|
286
286
|
attr_accessor fallback_location: ::String
|
287
|
+
attr_accessor e_tag_algorithm_family: ("MD5up" | "SHA256up" | "SHA512up")
|
287
288
|
SENSITIVE: []
|
288
289
|
end
|
289
290
|
|
@@ -295,6 +296,7 @@ module Aws::Omics
|
|
295
296
|
attr_accessor sse_config: Types::SseConfig
|
296
297
|
attr_accessor creation_time: ::Time
|
297
298
|
attr_accessor fallback_location: ::String
|
299
|
+
attr_accessor e_tag_algorithm_family: ("MD5up" | "SHA256up" | "SHA512up")
|
298
300
|
SENSITIVE: []
|
299
301
|
end
|
300
302
|
|
@@ -438,7 +440,7 @@ module Aws::Omics
|
|
438
440
|
end
|
439
441
|
|
440
442
|
class ETag
|
441
|
-
attr_accessor algorithm: ("FASTQ_MD5up" | "BAM_MD5up" | "CRAM_MD5up")
|
443
|
+
attr_accessor algorithm: ("FASTQ_MD5up" | "BAM_MD5up" | "CRAM_MD5up" | "FASTQ_SHA256up" | "BAM_SHA256up" | "CRAM_SHA256up" | "FASTQ_SHA512up" | "BAM_SHA512up" | "CRAM_SHA512up")
|
442
444
|
attr_accessor source1: ::String
|
443
445
|
attr_accessor source2: ::String
|
444
446
|
SENSITIVE: []
|
@@ -477,6 +479,7 @@ module Aws::Omics
|
|
477
479
|
attr_accessor total_parts: ::Integer
|
478
480
|
attr_accessor part_size: ::Integer
|
479
481
|
attr_accessor content_length: ::Integer
|
482
|
+
attr_accessor s3_access: Types::ReadSetS3Access
|
480
483
|
SENSITIVE: []
|
481
484
|
end
|
482
485
|
|
@@ -821,6 +824,8 @@ module Aws::Omics
|
|
821
824
|
attr_accessor sse_config: Types::SseConfig
|
822
825
|
attr_accessor creation_time: ::Time
|
823
826
|
attr_accessor fallback_location: ::String
|
827
|
+
attr_accessor s3_access: Types::SequenceStoreS3Access
|
828
|
+
attr_accessor e_tag_algorithm_family: ("MD5up" | "SHA256up" | "SHA512up")
|
824
829
|
SENSITIVE: []
|
825
830
|
end
|
826
831
|
|
@@ -1367,6 +1372,11 @@ module Aws::Omics
|
|
1367
1372
|
SENSITIVE: []
|
1368
1373
|
end
|
1369
1374
|
|
1375
|
+
class ReadSetS3Access
|
1376
|
+
attr_accessor s3_uri: ::String
|
1377
|
+
SENSITIVE: []
|
1378
|
+
end
|
1379
|
+
|
1370
1380
|
class ReadSetUploadPartListFilter
|
1371
1381
|
attr_accessor created_after: ::Time
|
1372
1382
|
attr_accessor created_before: ::Time
|
@@ -1496,6 +1506,7 @@ module Aws::Omics
|
|
1496
1506
|
attr_accessor sse_config: Types::SseConfig
|
1497
1507
|
attr_accessor creation_time: ::Time
|
1498
1508
|
attr_accessor fallback_location: ::String
|
1509
|
+
attr_accessor e_tag_algorithm_family: ("MD5up" | "SHA256up" | "SHA512up")
|
1499
1510
|
SENSITIVE: []
|
1500
1511
|
end
|
1501
1512
|
|
@@ -1506,6 +1517,12 @@ module Aws::Omics
|
|
1506
1517
|
SENSITIVE: []
|
1507
1518
|
end
|
1508
1519
|
|
1520
|
+
class SequenceStoreS3Access
|
1521
|
+
attr_accessor s3_uri: ::String
|
1522
|
+
attr_accessor s3_access_point_arn: ::String
|
1523
|
+
SENSITIVE: []
|
1524
|
+
end
|
1525
|
+
|
1509
1526
|
class ServiceQuotaExceededException
|
1510
1527
|
attr_accessor message: ::String
|
1511
1528
|
SENSITIVE: []
|
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: aws-sdk-omics
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 1.
|
4
|
+
version: 1.24.0
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Amazon Web Services
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date: 2024-
|
11
|
+
date: 2024-04-11 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: aws-sdk-core
|