arvados-cli 0.1.20150603135055 → 0.1.20150605170031

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Files changed (3) hide show
  1. checksums.yaml +4 -4
  2. data/bin/crunch-job +11 -10
  3. metadata +3 -3
checksums.yaml CHANGED
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data/bin/crunch-job CHANGED
@@ -1299,8 +1299,15 @@ sub check_squeue
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  return;
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  }
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- # get a list of steps still running
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- my @squeue = `squeue --jobs=\Q$ENV{SLURM_JOB_ID}\E --steps --format='%i %j' --noheader`;
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+ # Get a list of steps still running. Note: squeue(1) says --steps
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+ # selects a format (which we override anyway) and allows us to
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+ # specify which steps we're interested in (which we don't).
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+ # Importantly, it also changes the meaning of %j from "job name" to
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+ # "step name" and (although this isn't mentioned explicitly in the
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+ # docs) switches from "one line per job" mode to "one line per step"
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+ # mode. Without it, we'd just get a list of one job, instead of a
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+ # list of N steps.
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+ my @squeue = `squeue --jobs=\Q$ENV{SLURM_JOB_ID}\E --steps --format='%j' --noheader`;
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  if ($? != 0)
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  {
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  Log(undef, "warning: squeue exit status $? ($!)");
@@ -1310,15 +1317,9 @@ sub check_squeue
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  # which of my jobsteps are running, according to squeue?
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  my %ok;
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- foreach (@squeue)
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+ for my $jobstepname (@squeue)
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  {
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- if (/^(\d+)\.(\d+) (\S+)/)
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- {
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- if ($1 eq $ENV{SLURM_JOB_ID})
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- {
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- $ok{$3} = 1;
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- }
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- }
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+ $ok{$jobstepname} = 1;
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  }
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  # Check for child procs >60s old and not mentioned by squeue.
metadata CHANGED
@@ -1,14 +1,14 @@
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  --- !ruby/object:Gem::Specification
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  name: arvados-cli
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  version: !ruby/object:Gem::Version
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- version: 0.1.20150603135055
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+ version: 0.1.20150605170031
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  platform: ruby
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  authors:
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  - Arvados Authors
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  autorequire:
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  bindir: bin
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  cert_chain: []
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- date: 2015-06-03 00:00:00.000000000 Z
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+ date: 2015-06-05 00:00:00.000000000 Z
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  dependencies:
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  - !ruby/object:Gem::Dependency
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  name: arvados
@@ -178,7 +178,7 @@ dependencies:
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  - - "<"
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  - !ruby/object:Gem::Version
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  version: 1.0.0
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- description: Arvados command line tools, git commit c4c8977ef25cc6805f2cca1dedfc83faecc0bc23
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+ description: Arvados command line tools, git commit b33597e94eec5f21fbbcfa72611a3b36397755d5
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  email: gem-dev@curoverse.com
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  executables:
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  - arv