arvados-cli 0.1.20140610143209 → 0.1.20140610145921
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- checksums.yaml +4 -4
- data/bin/arv-run-pipeline-instance +17 -1
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA1:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 9b4bf40ffb70099135501a04d76444ba347a57f0
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4
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+
data.tar.gz: 7f2a76126ccd9d872760ac87de9e3220fbad1c0a
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5
5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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+
metadata.gz: 1a7be2ca224ce3dd62c5f87667ce158e597af617dac2adb4dc9b913326ac32ffa2282f513d38830d486ddf6ed4657a5d61b82b70e836560f8763b009069b1fdc
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7
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+
data.tar.gz: 3e09390e8f9ce9f3ecf349603dd7f1fefbd10c28f7ab6d5b80b17d5da0212bbbbf8335138603c2b9697a951db9c861ff0b029c984a9d86eee3530522d2fe2f49
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@@ -443,6 +443,7 @@ class WhRunPipelineInstance
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443
443
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moretodo = true
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444
444
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interrupted = false
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445
445
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446
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+
job_creation_failed = 0
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446
447
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while moretodo
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447
448
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moretodo = false
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448
449
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@components.each do |cname, c|
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@@ -485,7 +486,8 @@ class WhRunPipelineInstance
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485
486
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debuglog "component #{cname} new job #{job[:uuid]}"
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486
487
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c[:job] = job
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487
488
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else
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488
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-
debuglog "component #{cname} new job failed"
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489
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+
debuglog "component #{cname} new job failed", 0
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490
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+
job_creation_failed += 1
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489
491
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end
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490
492
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end
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491
493
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@@ -562,6 +564,11 @@ class WhRunPipelineInstance
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562
564
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moretodo = false
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563
565
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end
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564
566
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567
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+
# If job creation fails, just give up on this pipeline instance.
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568
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+
if job_creation_failed > 0
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569
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+
moretodo = false
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570
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end
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571
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+
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565
572
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if moretodo
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566
573
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begin
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567
574
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sleep 10
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@@ -591,6 +598,13 @@ class WhRunPipelineInstance
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591
598
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592
599
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success = (succeeded == @components.length)
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593
600
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601
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+
# A job create call failed. Just give up.
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602
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+
if job_creation_failed > 0
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603
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+
debuglog "job creation failed - giving up on this pipeline instance", 0
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604
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+
success = false
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605
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+
failed += 1
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606
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+
end
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607
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+
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594
608
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if interrupted
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595
609
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if success
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596
610
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@instance[:state] = 'Complete'
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@@ -603,6 +617,8 @@ class WhRunPipelineInstance
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603
617
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end
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604
618
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end
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605
619
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|
620
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+
debuglog "pipeline instance state is #{@instance[:state]}"
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621
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+
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606
622
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# set components_summary
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607
623
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components_summary = {"todo" => @components.length - ended, "done" => succeeded, "failed" => failed}
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608
624
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@instance[:components_summary] = components_summary
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metadata
CHANGED
@@ -1,7 +1,7 @@
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1
1
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--- !ruby/object:Gem::Specification
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2
2
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name: arvados-cli
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3
3
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version: !ruby/object:Gem::Version
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4
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-
version: 0.1.
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4
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+
version: 0.1.20140610145921
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5
5
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platform: ruby
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6
6
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authors:
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7
7
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- Arvados Authors
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@@ -146,7 +146,7 @@ dependencies:
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146
146
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- - "~>"
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147
147
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- !ruby/object:Gem::Version
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148
148
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version: '0.8'
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149
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-
description: This is the Arvados SDK CLI gem, git revision
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149
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+
description: This is the Arvados SDK CLI gem, git revision f0a048b4b9792550f59ee23b13c09cca21681eb4
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150
150
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email: gem-dev@curoverse.com
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151
151
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executables:
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152
152
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- arv
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