arvados-cli 0.1.20140106150809 → 0.1.20140110131136

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Files changed (3) hide show
  1. checksums.yaml +4 -4
  2. data/bin/arv +25 -1
  3. metadata +3 -3
checksums.yaml CHANGED
@@ -1,7 +1,7 @@
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- data.tar.gz: 46af868d61aaecd0fdd870d1185aae2638322a4e
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+ metadata.gz: a4b8da101b279224b702afe71e61f75db5afd4a8
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+ data.tar.gz: ffd6878e141e8c07129f15a682ed1876b8efba02
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  SHA512:
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- metadata.gz: fc0d5dafbb03cca986e1efe48860e1a232c8260be722e8be9568d3577ae4e4a20149c608de61184ecc51ac8d1c891fb8874171f7403e349b70e85676c4326583
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- data.tar.gz: 8740a3172fbd10213e3143ba9681158ce31c94d3e17156a3aac9eed384fa43ffcc0e25d954992cc610a6047c26fdb6f7458ea9540d1e847bf46a596ee1f358a8
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+ metadata.gz: be0a46d1631822b8edb04211014188fb8c0194fede50ff49078812c4360fccf910452b2c86057ba5030f6dc3dd0ed349b74cc9725f194396da90b95eaea363ce
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+ data.tar.gz: 9134c21d08a168363107a25f5a8cf1c3ea537cd707895d311ffcc65ebb66dc0b93363ce715dac814a5f19d6e454c468972675af903a0d5429afe6adc6481db43
data/bin/arv CHANGED
@@ -10,6 +10,26 @@ if RUBY_VERSION < '1.9.3' then
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  EOS
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  end
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+ # read authentication data from ~/.arvados if present
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+ lineno = 0
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+ config_file = File.expand_path('~/.arvados')
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+ if File.exist? config_file then
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+ File.open(config_file, 'r').each do |line|
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+ lineno = lineno + 1
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+ # skip comments
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+ if line.match('^\s*#') then
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+ next
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+ end
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+ var, val = line.chomp.split('=', 2)
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+ # allow environment settings to override config files.
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+ if var and val
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+ ENV[var] ||= val
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+ else
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+ warn "#{config_file}: #{lineno}: could not parse `#{line}'"
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+ end
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+ end
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+ end
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+
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  case ARGV[0]
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  when 'keep'
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  ARGV.shift
@@ -40,6 +60,9 @@ when 'pipeline'
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  "(see arv-run-pipeline-instance --help for details)\n"
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  end
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  abort
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+ when 'tag'
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+ ARGV.shift
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+ exec `which arv-tag`.strip, *ARGV
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  end
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  ENV['ARVADOS_API_VERSION'] ||= 'v1'
@@ -228,7 +251,7 @@ def parse_arguments(discovery_document)
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  discovered_params.each do |k,v|
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  k = k.to_sym
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  if ['object', 'array'].index(v["type"]) and method_opts.has_key? k
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- if method_opts[k].match /^\//
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+ if method_opts[k].andand.match /^\//
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  method_opts[k] = File.open method_opts[k], 'rb' do |f| f.read end
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  end
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  end
@@ -283,6 +306,7 @@ when
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  exit 0
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  else
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  request_body[:api_token] = ENV['ARVADOS_API_TOKEN']
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+ request_body[:_profile] = true
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  result = client.execute(:api_method => eval(api_method),
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  :parameters => request_parameters,
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  :body => request_body,
metadata CHANGED
@@ -1,14 +1,14 @@
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  --- !ruby/object:Gem::Specification
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  name: arvados-cli
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  version: !ruby/object:Gem::Version
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- version: 0.1.20140106150809
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+ version: 0.1.20140110131136
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  platform: ruby
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  authors:
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  - Arvados Authors
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  autorequire:
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  bindir: bin
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  cert_chain: []
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- date: 2014-01-06 00:00:00.000000000 Z
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+ date: 2014-01-10 00:00:00.000000000 Z
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  dependencies:
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  - !ruby/object:Gem::Dependency
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  name: google-api-client
@@ -108,7 +108,7 @@ dependencies:
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  - - ~>
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  - !ruby/object:Gem::Version
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  version: '0.8'
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- description: This is the Arvados SDK CLI gem, git revision 5cf53c5f133040aa21ebfb4e7687e8759cfea636
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+ description: This is the Arvados SDK CLI gem, git revision 6696af28df909c0eb45f6cee8e7a3fc1d5658104
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  email: gem-dev@clinicalfuture.com
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  executables:
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  - arv