anthro 0.1.0

checksums.yaml

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+SHA256:
+  metadata.gz: 1c6dcc0a9bff23720cbd5ed5ee499dcf37b52acdec10c0dc6bb38fba5920305a
+  data.tar.gz: e4c3898141293a2370840263c6c615e7bcf74abd0ad3d0cd5bf06c1c4e2eb330
+SHA512:
+  metadata.gz: 0614c63f8f64c81df5496e3e4a5439a2f0fc3ff3966b6db4942fb0053cc68bb73626a50cfb3a36db81eb62ef76ffdfdf95d65fe89ed651b5a3c61d94673b1d79
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data/.devcontainer/devcontainer.json

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+// For format details, see https://aka.ms/devcontainer.json. For config options, see the
+// README at: https://github.com/devcontainers/templates/tree/main/src/ruby
+{
+	"name": "Anthro",
+	// Or use a Dockerfile or Docker Compose file. More info: https://containers.dev/guide/dockerfile
+	"image": "mcr.microsoft.com/devcontainers/ruby:1-3.4-bullseye"
+	// Features to add to the dev container. More info: https://containers.dev/features.
+	// "features": {},
+	// Use 'forwardPorts' to make a list of ports inside the container available locally.
+	// "forwardPorts": [],
+	// Use 'postCreateCommand' to run commands after the container is created.
+	// "postCreateCommand": "ruby --version",
+	"postCreateCommand": "bin/setup"
+	// Configure tool-specific properties.
+	"customizations": {
+		"vscode": {
+			"extensions": [
+				"Shopify.ruby-lsp"
+			]
+		}
+	},
+	// Uncomment to connect as root instead. More info: https://aka.ms/dev-containers-non-root.
+	// "remoteUser": "root"
+}

data/.rubocop.yml

@@ -0,0 +1,8 @@
+AllCops:
+  TargetRubyVersion: 3.1
+
+Style/StringLiterals:
+  EnforcedStyle: double_quotes
+
+Style/StringLiteralsInInterpolation:
+  EnforcedStyle: double_quotes

data/CHANGELOG.md

@@ -0,0 +1,5 @@
+## [Unreleased]
+
+## [0.1.0] - 2025-03-20
+
+- Initial release

data/LICENSE.md

@@ -0,0 +1,20 @@
+Copyright (c) 2025 Harvard Medical School
+
+Permission is hereby granted, free of charge, to any person obtaining
+a copy of this software and associated documentation files (the
+"Software"), to deal in the Software without restriction, including
+without limitation the rights to use, copy, modify, merge, publish,
+distribute, sublicense, and/or sell copies of the Software, and to
+permit persons to whom the Software is furnished to do so, subject to
+the following conditions:
+
+The above copyright notice and this permission notice shall be
+included in all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
+LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
+OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
+WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

data/README.md

@@ -0,0 +1,89 @@
+# Anthro
+
+A Ruby gem for calculating anthropometric z-scores and percentiles based on the [WHO Growth Charts](https://www.cdc.gov/growthcharts/who-data-files.htm) and [CDC Growth Charts](https://www.cdc.gov/growthcharts/cdc-data-files.htm).
+
+## Installation
+
+Install the gem and add to the application's Gemfile by executing:
+
+```bash
+bundle add anthro
+```
+
+If bundler is not being used to manage dependencies, install the gem by executing:
+
+```bash
+gem install anthro
+```
+
+## Usage
+
+### Convenience Methods (Recommended)
+
+```ruby
+require 'anthro'
+
+# Weight (month-based)
+calc = Anthro.weight_for_age(sex: "male", age_months: 24.5, value: 13.0)
+puts "Z-Score: #{calc.z_score.round(2)}"
+puts "Percentile: #{calc.percentile.round(2)}%"
+
+# Weight (days-based): days devided by 30.4375
+calc = Anthro.weight_for_age(sex: "male", age_days: 3653, value: 33.0) # ~120 months
+puts "Z-Score: #{calc.z_score.round(2)}"
+puts "Percentile: #{calc.percentile.round(2)}%"
+
+# Height
+calc = Anthro.height_for_age(sex: "female", age_days: 1461, value: 100.0) # ~48 months
+puts "Z-Score: #{calc.z_score.round(2)}"
+puts "Percentile: #{calc.percentile.round(2)}%"
+
+# BMI
+calc = Anthro.bmi_for_age(sex: "male", age_months: 36, value: 16.0)
+puts "Z-Score: #{calc.z_score.round(2)}"
+puts "Percentile: #{calc.percentile.round(2)}%"
+
+# Head Circumference
+calc = Anthro.head_circumference_for_age(sex: "female", age_months: 12, value: 46.0)
+puts "Z-Score: #{calc.z_score.round(2)}"
+puts "Percentile: #{calc.percentile.round(2)}%"
+```
+
+### Supported Measurements
+
+- `Anthro.weight_for_age(sex:, age_months: or age_days:, value:)` (0–20 years)
+- `Anthro.height_for_age(sex:, age_months: or age_days:, value:)` (0–20 years)
+- `Anthro.bmi_for_age(sex:, age_months: or age_days:, value:)` (2–20 years)
+- `Anthro.head_circumference_for_age(sex:, age_months: or age_days:, value:)` (0–2 years)
+
+## Development
+
+After checking out the repo, run `bin/setup` to install dependencies. Then, run `rake test` to run the tests. You can also run `bin/console` for an interactive prompt that will allow you to experiment.
+
+To install this gem onto your local machine, run `bundle exec rake install`. To release a new version, update the version number in `version.rb`, and then run `bundle exec rake release`, which will create a git tag for the version, push git commits and the created tag, and push the `.gem` file to [rubygems.org](https://rubygems.org).
+
+## Data
+
+This gem includes WHO and CDC 2000 growth chart data from [WHO Growth Charts Data files](https://www.cdc.gov/growthcharts/who-data-files.htm) and [CDC Growth Charts Data Files](https://www.cdc.gov/growthcharts/cdc-data-files.htm).
+
+- Birth to 2 years (WHO)
+  - [Weight-for-age charts: Boys](https://ftp.cdc.gov/pub/Health_Statistics/NCHS/growthcharts/WHO-Boys-Weight-for-age-Percentiles.csv)
+  - [Weight-for-age charts: Girls](https://ftp.cdc.gov/pub/Health_Statistics/NCHS/growthcharts/WHO-Girls-Weight-for-age%20Percentiles.csv)
+  - [Length-for-age charts: Boys](https://ftp.cdc.gov/pub/Health_Statistics/NCHS/growthcharts/WHO-Boys-Length-for-age-Percentiles.csv)
+  - [Length-for-age charts: Girls](https://ftp.cdc.gov/pub/Health_Statistics/NCHS/growthcharts/WHO-Girls-Length-for-age-Percentiles.csv)
+  - [Head circumference-for-age charts: Boys](https://ftp.cdc.gov/pub/Health_Statistics/NCHS/growthcharts/WHO-Boys-Head-Circumference-for-age-Percentiles.csv)
+  - [Head circumference-for-age charts: Girls](https://ftp.cdc.gov/pub/Health_Statistics/NCHS/growthcharts/WHO-Girls-Head-Circumference-for-age-Percentiles.csv)
+
+- 2 to 20 years (CDC)
+
+  - [Weight-for-age charts](https://www.cdc.gov/growthcharts/data/zscore/wtage.csv)
+  - [Stature-for-age charts](https://www.cdc.gov/growthcharts/data/zscore/statage.csv)
+  - [BMI-for-age charts](https://www.cdc.gov/growthcharts/data/zscore/bmiagerev.csv)
+
+## Contributing
+
+Bug reports and pull requests are welcome on GitHub at https://github.com/hms-dbmi/anthro.
+
+## License
+
+See the [LICENSE](LICENSE.md) file for license rights and limitations (MIT).

data/Rakefile

@@ -0,0 +1,12 @@
+# frozen_string_literal: true
+
+require "bundler/gem_tasks"
+require "minitest/test_task"
+
+Minitest::TestTask.create
+
+require "rubocop/rake_task"
+
+RuboCop::RakeTask.new
+
+task default: %i[test rubocop]

data/data/WHO-Boys-Head-Circumference-for-age-Percentiles.csv

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data/data/WHO-Boys-Weight-for-age-Percentiles.csv

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data/data/WHO-Girls-Head-Circumference-for-age-Percentiles.csv

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data/data/WHO-Girls-Length-for-age-Percentiles.csv

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data/data/WHO-Girls-Weight-for-age%20Percentiles.csv

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