anncrsnp 0.1.5 → 0.1.6
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- checksums.yaml +4 -4
- data/README.md +1 -1
- data/bin/grdbfinder.rb +4 -8
- data/lib/anncrsnp/version.rb +1 -1
- metadata +2 -2
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA1:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 9a5b68efa127fe9ae6c1b409daa38ee22236068b
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4
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+
data.tar.gz: 4714dfd569a2568ddf055e346747de2bd03a5057
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5
5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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+
metadata.gz: a73bd75040ddf05079ba4555c9769ae45a41610520ae42827fda4f9e6ba45807b79501b947c1dd3d1dd9addc032107c8ac56ae047edba9ba9040534af906de8d
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7
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+
data.tar.gz: 874fb9ec1a453b33451d7d44710ec114de44bf5ba1c8701d1f17622a4222c96259f75bfb12e51a5b226ff835b6da492c82e67791a3553ed77c8289557d63f770
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data/README.md
CHANGED
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@@ -37,7 +37,7 @@ For further RVM installation, please visit https://rvm.io/
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37
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38
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### Windows
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39
39
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40
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-
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40
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+
To use AnNCR-SNP in your Windows system, you can install Ruby using RubyInstaller (http://rubyinstaller.org/downloads/), but taking into consideration that Ruby version must be lower than 2.3 and x64. You can download this concrete version: http://dl.bintray.com/oneclick/rubyinstaller/rubyinstaller-2.2.5-x64.exe
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41
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42
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During the installation, you have to mark all available options before continuing (Install Td/Tk support, Add Ruby executables to your PATH, Associate .rb and .rbw files with this Ruby installation).
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43
43
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data/bin/grdbfinder.rb
CHANGED
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@@ -8,8 +8,8 @@ require 'optparse'
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8
8
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require 'dataset'
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9
9
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require 'sqlite3'
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10
10
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require 'benchmark'
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11
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-
require 'net/http'
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12
11
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require 'zip'
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12
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+
require 'open-uri'
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13
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14
14
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######################################################################################################################
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15
15
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## METHODS
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@@ -347,15 +347,11 @@ def download_database(database_path)
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347
347
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out_path = File.dirname(database_path)
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348
348
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puts "Downloading database in #{out_path}, please be patient..."
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349
349
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zip_path = File.join(out_path, 'database.zip')
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350
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-
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351
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-
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352
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-
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353
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-
resp.read_body do |segment|
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354
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-
f.write(segment)
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355
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-
end
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350
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+
File.open(zip_path, "wb") do |saved_file|
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351
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+
open("http://bio-267-data.uma.es/database.zip", "rb") do |read_file|
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352
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+
saved_file.write(read_file.read)
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356
353
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end
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357
354
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end
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358
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-
f.close
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359
355
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puts "Decompressing database..."
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360
356
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Zip::File.open(zip_path) do |zip_file|
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361
357
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zip_file.each do |entry|
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data/lib/anncrsnp/version.rb
CHANGED
metadata
CHANGED
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@@ -1,7 +1,7 @@
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1
1
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--- !ruby/object:Gem::Specification
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2
2
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name: anncrsnp
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3
3
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version: !ruby/object:Gem::Version
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4
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-
version: 0.1.
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4
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+
version: 0.1.6
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5
5
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platform: ruby
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6
6
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authors:
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7
7
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- Elena Rojano
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@@ -9,7 +9,7 @@ authors:
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9
9
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autorequire:
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10
10
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bindir: bin
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11
11
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cert_chain: []
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12
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-
date: 2016-07-
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12
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+
date: 2016-07-25 00:00:00.000000000 Z
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13
13
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dependencies:
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14
14
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- !ruby/object:Gem::Dependency
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15
15
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name: bundler
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