alex_r 0.0.2 → 0.0.3

data/lib/alex_r.rb

@@ -1,25 +1,29 @@
-require 'open3'
+require 'open4'
 
 class AlexR
   def self.execute(output_file, input_file_path=nil)
     r_executable = "Rscript -"
     r_executable = r_executable.insert(0, "cd #{File.dirname(input_file_path)} && ") if input_file_path
-    
-    stdin, stdout, stderr = Open3.popen3(r_executable)
-    stdin << "pdf('#{output_file}')\n"
-    if input_file_path
-      File.open(input_file_path) do |file|
-        until file.eof?
-          stdin << "#{file.readline}\n"
+
+    r_output = ""
+    r_error = ""
+    status = Open4::popen4(r_executable) do |pid, stdin, stdout, stderr|
+      stdin << "pdf('#{output_file}')\n"
+      if input_file_path
+        File.open(input_file_path) do |file|
+          until file.eof?
+            stdin << "#{file.readline}\n"
+          end
         end
+      else
+        yield(stdin) if block_given?
       end
-    else
-      yield(stdin) if block_given?
+      stdin.close
+      r_output = stdout.read
+      r_error = stderr.read
     end
-    stdin.close
     
-    errors = stderr.readlines
-    raise errors.join("\n") unless errors.empty?
-    return stdout.readlines.join("\n")
+    raise r_error unless status.success?
+    r_output
   end
 end

metadata

@@ -1,13 +1,13 @@
 --- !ruby/object:Gem::Specification 
 name: alex_r
 version: !ruby/object:Gem::Version 
-  hash: 27
+  hash: 25
   prerelease: 
   segments: 
   - 0
   - 0
-  - 2
-  version: 0.0.2
+  - 3
+  version: 0.0.3
 platform: ruby
 authors: 
 - Jae Lee
@@ -15,10 +15,25 @@ autorequire:
 bindir: bin
 cert_chain: []
 
-date: 2011-02-09 00:00:00 +00:00
+date: 2011-02-10 00:00:00 +00:00
 default_executable: 
-dependencies: []
-
+dependencies: 
+- !ruby/object:Gem::Dependency 
+  name: open4
+  prerelease: false
+  requirement: &id001 !ruby/object:Gem::Requirement 
+    none: false
+    requirements: 
+    - - ">="
+      - !ruby/object:Gem::Version 
+        hash: 21
+        segments: 
+        - 1
+        - 0
+        - 1
+        version: 1.0.1
+  type: :runtime
+  version_requirements: *id001
 description: Allows you execute RScript
 email: jlee@yetitrails.com
 executables: []