activerdf_redland 1.0

data/LICENSE

@@ -0,0 +1,504 @@
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+

data/README

@@ -0,0 +1,9 @@
+== ActiveRDF Redland adapter
+This is the ActiveRDF adapter to the Redland RDF store. 
+See http://www.activerdf.org/ and http://librdf.org for more information.
+
+== License
+This adapter is distributed under the LGPL license.
+
+== Authors
+* Eyal Oren

data/Rakefile

@@ -0,0 +1,40 @@
+require 'rake'
+require 'rake/testtask'
+require 'rake/clean'
+require 'rake/gempackagetask'
+require 'rake/rdoctask'
+require '../tools/rakehelp'
+require 'fileutils'
+include FileUtils
+
+setup_tests
+setup_clean ["pkg", "lib/*.bundle", "*.gem", ".config"]
+
+setup_rdoc ['README', 'LICENSE', 'lib/**/*.rb', 'doc/**/*.rdoc']
+
+desc "Does a full compile, test run"
+task :default => [:test, :package]
+
+version="1.0"
+name="activerdf_redland"
+
+setup_gem(name, version) do |spec|
+  spec.summary = "ActiveRDF adapter to Redland RDF store" 
+  spec.description = spec.summary
+  spec.author="Eyal Oren <eyal.oren@deri.org"
+  spec.add_dependency('gem_plugin', '>= 0.2.1')
+  spec.add_dependency('activerdf', '>= 0.9.2')
+	spec.requirements << 'librdf0 (Redland)'
+	spec.requirements << 'librdf-ruby (Redland Ruby bindings)'
+end
+
+
+task :install => [:package] do
+  sh %{sudo gem install pkg/#{name}-#{version}.gem}
+end
+
+task :uninstall => [:clean] do
+  sh %{sudo gem uninstall #{name}}
+end
+
+task :reinstall => [:uninstall, :install]

data/lib/activerdf_redland/init.rb

@@ -0,0 +1,10 @@
+# add the directory in which this file is located to the ruby loadpath
+file =
+if File.symlink?(__FILE__)
+  File.readlink(__FILE__)
+else
+  __FILE__
+end
+$: << File.dirname(File.expand_path(file))
+
+require 'redland.rb'

data/lib/activerdf_redland/redland.rb

@@ -0,0 +1,211 @@
+# Adapter to Redland database
+# uses SPARQL for querying
+#
+# Author:: Eyal Oren
+# Copyright:: (c) 2005-2006 Eyal Oren
+# License:: LGPL
+require 'active_rdf'
+require 'federation/connection_pool'
+require 'queryengine/query2sparql'
+require 'rdf/redland'
+
+# TODO: add json results for eric hanson
+
+class RedlandAdapter < ActiveRdfAdapter
+	$log.info "loading Redland adapter"
+	ConnectionPool.register_adapter(:redland,self)
+	
+	# instantiate connection to Redland database
+	def initialize(params = {})
+
+    # TODO: check if the given file exists, or at least look for an exception from redland
+		if params[:location] and params[:location] != :memory
+			# setup file locations for redland database
+			path, file = File.split(params[:location])
+			type = 'bdb'
+		else
+			# fall back to in-memory redland 	
+			type = 'memory'; path = '';	file = '.'
+		end
+		
+		$log.info "RedlandAdapter: initializing with type: #{type} file: #{file} path: #{path}"
+		
+		@store = Redland::HashStore.new(type, file, path, false)
+		@model = Redland::Model.new @store
+
+		@reads = true
+		@writes = true
+	end	
+	
+	# load a file from the given location with the given syntax into the model.
+	# use Redland syntax strings, e.g. "ntriples" or "rdfxml", defaults to "ntriples"
+	def load(location, syntax="ntriples")
+    $log.debug "Redland: loading file with syntax: #{syntax} and location: #{location}"
+    parser = Redland::Parser.new(syntax, "", nil)
+    parser.parse_into_model(@model, "file:#{location}")
+	end
+
+	# yields query results (as many as requested in select clauses) executed on data source
+	def query(query)
+		qs = Query2SPARQL.translate(query)
+    $log.debug "RedlandAdapter: after translating to SPARQL, query is: #{qs}"
+		
+		time = Time.now
+		clauses = query.select_clauses.size
+		redland_query = Redland::Query.new(qs, 'sparql')
+		query_results = @model.query_execute(redland_query)
+		$log.debug "RedlandAdapter: query response from Redland took: #{Time.now - time}s"
+		
+		$log.debug "RedlandAdapter: query response has size: #{query_results.size}"
+
+		# verify if the query has failed
+		if query_results.nil?
+		  $log.debug "RedlandAdapter: query has failed with nil result"
+		  return false
+		end
+		if not query_results.is_bindings?
+		  $log.debug "RedlandAdapter: query has failed without bindings"
+		  return false
+		end
+
+		# convert the result to array
+		#TODO: if block is given we should not parse all results into array first
+		results = query_result_to_array(query_results) 
+    $log.debug "RedlandAdapter: result of query is #{results.join(', ')}"
+		
+		if block_given?
+			results.each do |clauses|
+				yield(*clauses)
+			end
+		else
+			results
+		end
+	end
+
+	# executes query and returns results as SPARQL JSON or XML results
+	# requires svn version of redland-ruby bindings
+	# * query: ActiveRDF Query object
+	# * result_format: :json or :xml
+	def get_query_results(query, result_format=nil)
+		get_sparql_query_results(Query2SPARQL.translate(query), result_format)
+	end
+
+	# executes sparql query and returns results as SPARQL JSON or XML results
+	# * query: sparql query string
+	# * result_format: :json or :xml
+	def get_sparql_query_results(qs, result_format=nil)
+		# author: Eric Hanson
+
+		# set uri for result formatting
+		result_uri = 
+			case result_format
+		 	when :json
+        Redland::Uri.new('http://www.w3.org/2001/sw/DataAccess/json-sparql/')
+      when :xml
+        Redland::Uri.new('http://www.w3.org/TR/2004/WD-rdf-sparql-XMLres-20041221/')
+			end
+
+		# query redland
+    redland_query = Redland::Query.new(qs, 'sparql')
+    query_results = @model.query_execute(redland_query)
+
+		# get string representation in requested result_format (json or xml)
+    query_results.to_string()
+  end
+	
+	# add triple to datamodel
+	def add(s, p, o)
+    $log.debug "adding triple #{s} #{p} #{o}"
+
+		# verify input
+		if s.nil? || p.nil? || o.nil?
+      $log.debug "cannot add triple with empty subject, exiting"
+		  return false
+		end 
+		
+		unless s.respond_to?(:uri) && p.respond_to?(:uri)
+      $log.debug "cannot add triple where s/p are not resources, exiting"		
+		  return false
+		end
+	
+		begin
+		  @model.add(wrap(s), wrap(p), wrap(o))		  
+			save if ConnectionPool.auto_flush?
+		rescue Redland::RedlandError => e
+		  $log.warn "RedlandAdapter: adding triple failed in Redland library: #{e}"
+		  return false
+		end		
+	end
+
+	# deletes triple(s,p,o) from datastore
+	# nil parameters match anything: delete(nil,nil,nil) will delete all triples
+	def delete(s,p,o)
+		s = wrap(s) unless s.nil?
+		p = wrap(p) unless p.nil?
+		o = wrap(o) unless o.nil?
+		@model.delete(s,p,o)
+	end
+
+	# saves updates to the model into the redland file location
+	def save
+		Redland::librdf_model_sync(@model.model).nil?
+	end
+	alias flush save
+	
+	# returns size of datasources as number of triples
+	#
+	# warning: expensive method as it iterates through all statements
+	def size
+		# we cannot use @model.size, because redland does not allow counting of 
+		# file-based models (@model.size raises an error if used on a file)
+		
+		# instead, we just dump all triples, and count them
+		stats = []
+    @model.statements{|s,p,o| stats << [s,p,o]}
+		stats.size
+	end
+	
+	################ helper methods ####################
+	#TODO: if block is given we should not parse all results into array first
+	def query_result_to_array(query_results)
+	 	results = []
+	 	number_bindings = query_results.binding_names.size
+	 	
+	 	# walk through query results, and construct results array
+	 	# by looking up each result (if it is a resource) and adding it to the result-array
+	 	# for literals we only add the values
+	 	
+	 	# redland results are set that needs to be iterated
+	 	while not query_results.finished?
+	 		# we collect the bindings in each row and add them to results
+	 		results << (0..number_bindings-1).collect do |i|	 		
+	 			# node is the query result for one binding
+	 			node = query_results.binding_value(i)
+
+				# we determine the node type
+ 				if node.literal?
+ 					# for literal nodes we just return the value
+ 					node.to_s
+ 				elsif node.blank?
+ 				  # blank nodes we ignore
+ 				  nil
+			  else
+ 				 	# other nodes are rdfs:resources
+ 					RDFS::Resource.new(node.uri.to_s)
+	 			end
+	 		end
+	 		# iterate through result set
+	 		query_results.next
+	 	end
+	 	results
+	end	 	
+	
+	def wrap node
+		case node
+		when RDFS::Resource
+			Redland::Uri.new(node.uri)
+		else
+			Redland::Literal.new(node.to_s)
+		end
+	end
+end

data/test/test_person_data.nt

@@ -0,0 +1,42 @@
+@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
+@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
+@prefix ar: <http://activerdf.org/test/> .
+
+ar:Person a rdfs:Class .
+# each class is subclass of resource
+ar:Person rdfs:subClassOf rdfs:Resource .
+
+ar:eyal a ar:Person .
+ar:eyal ar:age "27".
+ar:eyal ar:eye "blue".
+# inferred statements about eyal
+
+# all properties of Person are also properties of Resource
+ar:age rdfs:domain rdfs:Resource .
+ar:eye rdfs:domain rdfs:Resource .
+ar:car rdfs:domain rdfs:Resource .
+
+ar:age a rdf:Property .
+ar:eye a rdf:Property .
+ar:car a rdf:Property .
+ar:age rdfs:domain ar:Person .
+ar:age rdfs:range rdf:Literal .
+ar:eye rdfs:domain ar:Person .
+ar:eye rdfs:range rdf:Literal .
+ar:car rdfs:domain ar:Person .
+ar:car rdfs:range rdf:Literal .
+
+# everything is a resource
+ar:Person a rdfs:Resource .
+ar:eye a rdfs:Resource .
+ar:eyal a rdfs:Resource .
+ar:age a rdfs:Resource .
+ar:car a rdfs:Resource .
+
+# standard stuff
+rdfs:Class a rdfs:Class .
+rdfs:Class a rdfs:Resource .
+rdf:Property a rdfs:Class .
+rdf:Property a rdfs:Resource .
+rdf:type rdfs:domain rdfs:Resource .
+rdf:type rdfs:range rdfs:Class .

data/test/test_redland_adapter.rb

@@ -0,0 +1,199 @@
+# Author:: Eyal Oren
+# Copyright:: (c) 2005-2006
+# License:: LGPL
+
+require 'test/unit'
+require 'rubygems'
+require 'active_rdf'
+require 'federation/federation_manager'
+require 'queryengine/query'
+
+class TestRedlandAdapter < Test::Unit::TestCase
+  def setup
+    ConnectionPool.clear
+  end
+
+  def teardown
+  end
+
+  def test_registration
+    adapter = ConnectionPool.add_data_source(:type => :redland)
+    assert_instance_of RedlandAdapter, adapter
+  end
+
+  def test_redland_connections
+    adapter = RedlandAdapter.new({})
+    assert_instance_of RedlandAdapter, adapter
+  end
+
+  def test_simple_query
+    adapter = ConnectionPool.add_data_source(:type => :redland)
+
+    eyal = RDFS::Resource.new 'eyaloren.org'
+    age = RDFS::Resource.new 'foaf:age'
+    test = RDFS::Resource.new 'test'
+
+    adapter.add(eyal, age, test)
+    result = Query.new.distinct(:s).where(:s, :p, :o).execute
+
+    assert_instance_of RDFS::Resource, result
+    assert_equal 'eyaloren.org', result.uri
+  end
+
+  def test_federated_query
+    adapter1 = ConnectionPool.add_data_source(:type => :redland)
+    adapter2 = ConnectionPool.add_data_source(:type => :redland, :fake_symbol_to_get_unique_adapter => true)
+
+    eyal = RDFS::Resource.new 'eyaloren.org'
+    age = RDFS::Resource.new 'foaf:age'
+    test = RDFS::Resource.new 'test'
+    test2 = RDFS::Resource.new 'test2'
+
+    adapter1.add(eyal, age, test)
+    adapter2.add(eyal, age, test2)
+
+    # assert only one distinct subject is found (same one in both adapters)
+    assert_equal 1, Query.new.distinct(:s).where(:s, :p, :o).execute(:flatten=>false).size
+
+    # assert two distinct objects are found
+    results = Query.new.distinct(:o).where(:s, :p, :o).execute
+    assert_equal 2, results.size
+
+    results.all? {|result| assert result.instance_of?(RDFS::Resource) }
+  end
+
+  def test_query_with_block
+    adapter = ConnectionPool.add_data_source(:type => :redland)
+
+    eyal = RDFS::Resource.new 'eyaloren.org'
+    age = RDFS::Resource.new 'foaf:age'
+    test = RDFS::Resource.new 'test'
+
+    adapter.add(eyal, age, test)
+    Query.new.select(:s,:p).where(:s,:p,:o).execute do |s,p|
+      assert_equal 'eyaloren.org', s.uri
+      assert_equal 'foaf:age', p.uri
+    end
+  end
+  
+  def test_load_from_file
+    adapter = ConnectionPool.add_data_source :type => :redland
+    # adapter.load("/tmp/test_person_data.nt", "turtle")
+    # adapter.load("/home/metaman/workspaces/deri-workspace/activerdf/test/test_person_data.nt", "turtle")
+    adapter.load("#{File.dirname(__FILE__)}/test_person_data.nt", "turtle")
+    assert_equal 28, adapter.size  
+  end
+
+  def test_person_data
+    ConnectionPool.add_data_source :type => :redland, :location => 'test/test-person'
+    Namespace.register(:test, 'http://activerdf.org/test/')
+
+    eyal = Namespace.lookup(:test, :eyal)
+    eye = Namespace.lookup(:test, :eye)
+    person = Namespace.lookup(:test, :Person)
+    type = Namespace.lookup(:rdf, :type)
+    resource = Namespace.lookup(:rdfs,:resource)
+
+    color = Query.new.select(:o).where(eyal, eye,:o).execute
+    assert 'blue', color
+    assert_instance_of String, color
+
+    ObjectManager.construct_classes
+    assert eyal.instance_of?(TEST::Person)
+    assert eyal.instance_of?(RDFS::Resource)
+  end
+
+  def test_federated_query
+    adapter1 = ConnectionPool.add_data_source(:type => :redland)
+    adapter2 = ConnectionPool.add_data_source(:type => :redland, :fake_symbol_to_get_unique_adapter => true)
+
+    eyal = RDFS::Resource.new 'eyaloren.org'
+    age = RDFS::Resource.new 'foaf:age'
+    test = RDFS::Resource.new 'test'
+    test2 = RDFS::Resource.new 'test2'
+
+    adapter1.add(eyal, age, test)
+    adapter2.add(eyal, age, test2)
+
+    # assert only one distinct subject is found (same one in both adapters)
+    assert_equal 1, Query.new.distinct(:s).where(:s, :p, :o).execute(:flatten=>false).size
+
+    # assert two distinct objects are found
+    results = Query.new.distinct(:o).where(:s, :p, :o).execute
+    assert_equal 2, results.size
+
+    results.all? {|result| assert result.instance_of?(RDFS::Resource) }
+  end
+
+  def test_query_with_block
+    adapter = ConnectionPool.add_data_source(:type => :redland)
+
+    eyal = RDFS::Resource.new 'eyaloren.org'
+    age = RDFS::Resource.new 'foaf:age'
+    test = RDFS::Resource.new 'test'
+
+    adapter.add(eyal, age, test)
+    Query.new.select(:s,:p).where(:s,:p,:o).execute do |s,p|
+      assert_equal 'eyaloren.org', s.uri
+      assert_equal 'foaf:age', p.uri
+    end
+  end
+
+  def test_person_data
+    adapter = ConnectionPool.add_data_source :type => :redland
+    adapter.load("#{File.dirname(__FILE__)}/test_person_data.nt", "turtle")
+
+    Namespace.register(:test, 'http://activerdf.org/test/')
+
+    eyal = Namespace.lookup(:test, :eyal)
+    eye = Namespace.lookup(:test, :eye)
+    person = Namespace.lookup(:test, :Person)
+    type = Namespace.lookup(:rdf, :type)
+    resource = Namespace.lookup(:rdfs,:resource)
+
+    color = Query.new.select(:o).where(eyal, eye,:o).execute
+    assert_equal 'blue', color
+    assert_instance_of String, color
+
+    ObjectManager.construct_classes
+    assert eyal.instance_of?(TEST::Person)
+    assert eyal.instance_of?(RDFS::Resource)
+  end
+  
+  def test_write_to_file_and_reload
+    require 'tmpdir'
+    location = "#{Dir.tmpdir}/redland-temp"
+    adapter = ConnectionPool.add_data_source(:type => :redland, :location => location)
+
+    eyal = RDFS::Resource.new 'eyaloren.org'
+    age = RDFS::Resource.new 'foaf:age'
+    test = RDFS::Resource.new 'test'
+
+    adapter.add(eyal, age, test)
+    adapter.save 
+    
+    # flush the pool and freshly load the file we just wrote into
+    ConnectionPool.clear
+    adapter2 = ConnectionPool.add_data_source(:type => :redland, :location => location)
+
+    assert adapter2.object_id != adapter.object_id
+    assert_equal 1, adapter2.size
+  end
+
+	def test_sparql_query
+		adapter = ConnectionPool.add_data_source :type => :redland
+
+    eyal = RDFS::Resource.new 'eyaloren.org'
+    age = RDFS::Resource.new 'foaf:age'
+    test = RDFS::Resource.new 'test'
+    adapter.add(eyal, age, test)
+
+    adapter.save 
+		query = Query.new.distinct(:s).where(:s,:p,:o)
+		results = adapter.get_query_results(query)
+
+		# TODO: test if results are correct; but we do this only when redland 
+		# supports this method in release
+		assert results.include?('eyaloren.org')
+	end
+end

metadata

@@ -0,0 +1,71 @@
+--- !ruby/object:Gem::Specification 
+rubygems_version: 0.9.0
+specification_version: 1
+name: activerdf_redland
+version: !ruby/object:Gem::Version 
+  version: "1.0"
+date: 2006-11-02 00:00:00 +00:00
+summary: ActiveRDF adapter to Redland RDF store
+require_paths: 
+- lib
+email: 
+homepage: 
+rubyforge_project: 
+description: ActiveRDF adapter to Redland RDF store
+autorequire: 
+default_executable: 
+bindir: bin
+has_rdoc: true
+required_ruby_version: !ruby/object:Gem::Version::Requirement 
+  requirements: 
+  - - ">"
+    - !ruby/object:Gem::Version 
+      version: 0.0.0
+  version: 
+platform: ruby
+signing_key: 
+cert_chain: 
+post_install_message: 
+authors: 
+- Eyal Oren <eyal.oren@deri.org
+files: 
+- LICENSE
+- README
+- Rakefile
+- test/test_redland_adapter.rb
+- test/test_person_data.nt
+- lib/activerdf_redland
+- lib/activerdf_redland/redland.rb
+- lib/activerdf_redland/init.rb
+test_files: []
+
+rdoc_options: []
+
+extra_rdoc_files: 
+- README
+executables: []
+
+extensions: []
+
+requirements: 
+- librdf0 (Redland)
+- librdf-ruby (Redland Ruby bindings)
+dependencies: 
+- !ruby/object:Gem::Dependency 
+  name: gem_plugin
+  version_requirement: 
+  version_requirements: !ruby/object:Gem::Version::Requirement 
+    requirements: 
+    - - ">="
+      - !ruby/object:Gem::Version 
+        version: 0.2.1
+    version: 
+- !ruby/object:Gem::Dependency 
+  name: activerdf
+  version_requirement: 
+  version_requirements: !ruby/object:Gem::Version::Requirement 
+    requirements: 
+    - - ">="
+      - !ruby/object:Gem::Version 
+        version: 0.9.2
+    version: