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- data/lib/activerdf_rdflite/init.rb +11 -0
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data/LICENSE
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GNU LESSER GENERAL PUBLIC LICENSE
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Version 2.1, February 1999
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Copyright (C) 1991, 1999 Free Software Foundation, Inc.
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To apply these terms, attach the following notices to the library. It is
|
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|
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|
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|
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|
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|
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|
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This library is free software; you can redistribute it and/or
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477
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This library is distributed in the hope that it will be useful,
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Also add information on how to contact you by electronic and paper mail.
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You should also get your employer (if you work as a programmer) or your
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|
494
|
+
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495
|
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496
|
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Yoyodyne, Inc., hereby disclaims all copyright interest in the
|
497
|
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library `Frob' (a library for tweaking knobs) written by James Random Hacker.
|
498
|
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|
499
|
+
<signature of Ty Coon>, 1 April 1990
|
500
|
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Ty Coon, President of Vice
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501
|
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|
502
|
+
That's all there is to it!
|
503
|
+
|
504
|
+
|
data/README
ADDED
@@ -0,0 +1,16 @@
|
|
1
|
+
== Welcome to rdflite
|
2
|
+
|
3
|
+
rdflite is a small RDF datastore, based on sqlite3. It can be used as a
|
4
|
+
datastore for ActiveRDF: it acts as a gemplugin for ActiveRDF. rdflite does not
|
5
|
+
scale well for large datasets, but is very fast for small ones. It supports the
|
6
|
+
full ActiveRDF query grammar (basically, select/distinct/count with arbitrary
|
7
|
+
joins in the where clauses) and offers full-text search over the literals if
|
8
|
+
ferret is installed.
|
9
|
+
|
10
|
+
See http://www.activerdf.org/ for more information.
|
11
|
+
|
12
|
+
== License
|
13
|
+
rdflite is distributed under the LGPL license.
|
14
|
+
|
15
|
+
== Authors
|
16
|
+
* Eyal Oren
|
data/Rakefile
ADDED
@@ -0,0 +1,44 @@
|
|
1
|
+
require 'rake'
|
2
|
+
require 'rake/testtask'
|
3
|
+
require 'rake/clean'
|
4
|
+
require 'rake/gempackagetask'
|
5
|
+
require 'rake/rdoctask'
|
6
|
+
require '../tools/rakehelp'
|
7
|
+
require 'fileutils'
|
8
|
+
include FileUtils
|
9
|
+
|
10
|
+
setup_tests
|
11
|
+
setup_rdoc ['README', 'LICENSE', 'lib/**/*.rb', 'doc/**/*.rdoc']
|
12
|
+
|
13
|
+
desc "test and package gem"
|
14
|
+
task :default => [:test, :package]
|
15
|
+
|
16
|
+
# get ActiveRdfVersion from commandline
|
17
|
+
ActiveRdfVersion = ENV['REL'] || '0.9.7'
|
18
|
+
NAME="activerdf_rdflite"
|
19
|
+
GEMNAME="#{NAME}-#{ActiveRdfVersion}.gem"
|
20
|
+
|
21
|
+
# define package task
|
22
|
+
setup_gem(NAME,ActiveRdfVersion) do |spec|
|
23
|
+
spec.summary = "an RDF database for usage in ActiveRDF (based on sqlite3)"
|
24
|
+
spec.description = spec.summary
|
25
|
+
spec.author="Eyal Oren <eyal.oren@deri.org"
|
26
|
+
spec.add_dependency('gem_plugin', '>= 0.2.1')
|
27
|
+
spec.add_dependency('activerdf', '>= 0.9.2')
|
28
|
+
spec.add_dependency('sqlite3-ruby', '>= 1.1.0')
|
29
|
+
end
|
30
|
+
|
31
|
+
task :install => [:package] do
|
32
|
+
sh %{sudo gem install pkg/#{name}-#{version}.gem}
|
33
|
+
end
|
34
|
+
|
35
|
+
task :uninstall => [:clean] do
|
36
|
+
sh %{sudo gem uninstall #{name}}
|
37
|
+
end
|
38
|
+
|
39
|
+
task :reinstall => [:uninstall, :install]
|
40
|
+
|
41
|
+
task :upload => :package do |task|
|
42
|
+
sh "scp pkg/#{GEMNAME} eyal@m3pe.org:/home/eyal/webs/activerdf/gems/"
|
43
|
+
end
|
44
|
+
|
@@ -0,0 +1,471 @@
|
|
1
|
+
# RDFLite is a lightweight RDF database on top of sqlite3. It can act as adapter
|
2
|
+
# in ActiveRDF. It supports on-disk and in-memory usage, and allows keyword
|
3
|
+
# search if ferret is installed.
|
4
|
+
#
|
5
|
+
# Author:: Eyal Oren
|
6
|
+
# Copyright:: (c) 2005-2006 Eyal Oren
|
7
|
+
# License:: LGPL
|
8
|
+
|
9
|
+
require 'sqlite3'
|
10
|
+
require 'active_rdf'
|
11
|
+
require 'federation/connection_pool'
|
12
|
+
|
13
|
+
$log.info "loading RDFLite adapter"
|
14
|
+
|
15
|
+
begin
|
16
|
+
require 'ferret'
|
17
|
+
@@have_ferret = true
|
18
|
+
rescue LoadError
|
19
|
+
$log.info "Keyword search is disabled since we could not load Ferret. To
|
20
|
+
enable, please do \"gem install ferret\""
|
21
|
+
@@have_ferret = false
|
22
|
+
end
|
23
|
+
|
24
|
+
class RDFLite < ActiveRdfAdapter
|
25
|
+
ConnectionPool.register_adapter(:rdflite,self)
|
26
|
+
bool_accessor :keyword_search
|
27
|
+
|
28
|
+
# instantiates RDFLite database
|
29
|
+
# available parameters:
|
30
|
+
# * :location => filepath (defaults to memory)
|
31
|
+
# * :keyword => true/false (defaults to true)
|
32
|
+
# * :pidx, :oidx, etc. => true/false (enable/disable these indices)
|
33
|
+
def initialize(params = {})
|
34
|
+
$log.info "initialised rdflite with params #{params.to_s}"
|
35
|
+
|
36
|
+
@reads = true
|
37
|
+
@writes = true
|
38
|
+
|
39
|
+
# if no file-location given, we use in-memory store
|
40
|
+
file = params[:location] || ':memory:'
|
41
|
+
@db = SQLite3::Database.new(file)
|
42
|
+
|
43
|
+
# we enable keyword unless the user specifies otherwise
|
44
|
+
@keyword_search = if params[:keyword].nil?
|
45
|
+
true
|
46
|
+
else
|
47
|
+
params[:keyword]
|
48
|
+
end
|
49
|
+
|
50
|
+
# we can only do keyword search if ferret is found
|
51
|
+
@keyword_search &= @@have_ferret
|
52
|
+
$log.debug "we #{keyword_search? ? "do" : "don't"} have keyword search"
|
53
|
+
|
54
|
+
if keyword_search?
|
55
|
+
# we initialise the ferret index, either as a file or in memory
|
56
|
+
|
57
|
+
# we setup the fields not to store object's contents
|
58
|
+
infos = Ferret::Index::FieldInfos.new
|
59
|
+
infos.add_field(:subject, :store => :yes, :index => :no, :term_vector => :no)
|
60
|
+
infos.add_field(:object, :store => :no) #, :index => :omit_norms)
|
61
|
+
|
62
|
+
@ferret = if params[:location]
|
63
|
+
Ferret::I.new(:path => params[:location] + '.ferret', :field_infos => infos)
|
64
|
+
else
|
65
|
+
Ferret::I.new(:field_infos => infos)
|
66
|
+
end
|
67
|
+
end
|
68
|
+
|
69
|
+
# turn off filesystem synchronisation for speed
|
70
|
+
@db.synchronous = 'off'
|
71
|
+
|
72
|
+
# create triples table. since triples are unique, inserted duplicates are
|
73
|
+
@db.execute('create table if not exists triple(s,p,o, unique(s,p,o) on conflict ignore)')
|
74
|
+
|
75
|
+
create_indices(params)
|
76
|
+
|
77
|
+
$log.debug("opened connection to #{file}")
|
78
|
+
$log.debug("database contains #{size} triples")
|
79
|
+
end
|
80
|
+
|
81
|
+
# returns the number of triples in the datastore (incl. possible duplicates)
|
82
|
+
def size
|
83
|
+
@db.execute('select count(*) from triple')[0][0].to_i
|
84
|
+
end
|
85
|
+
|
86
|
+
# returns all triples in the datastore
|
87
|
+
def dump
|
88
|
+
@db.execute('select s,p,o from triple') do |s,p,o|
|
89
|
+
[s,p,o].join(' ')
|
90
|
+
end
|
91
|
+
end
|
92
|
+
|
93
|
+
# deletes all triples from datastore
|
94
|
+
def clear
|
95
|
+
@db.execute('delete from triple')
|
96
|
+
end
|
97
|
+
|
98
|
+
# deletes triple(s,p,o) from datastore
|
99
|
+
# nil parameters match anything: delete(nil,nil,nil) will delete all triples
|
100
|
+
def delete(s,p,o)
|
101
|
+
# convert input to internal format
|
102
|
+
# leave nil input alone (we'll deal with it later)
|
103
|
+
s = "<#{s.uri}>" unless s.nil?
|
104
|
+
p = "<#{p.uri}>" unless p.nil?
|
105
|
+
o = case o
|
106
|
+
when RDFS::Resource
|
107
|
+
"<#{o.uri}>"
|
108
|
+
else
|
109
|
+
"\"#{o.to_s}\""
|
110
|
+
end unless o.nil?
|
111
|
+
|
112
|
+
# construct where clause for deletion (for all non-nil input)
|
113
|
+
where_clauses = []
|
114
|
+
conditions = []
|
115
|
+
unless s.nil?
|
116
|
+
conditions << s
|
117
|
+
where_clauses << 's = ?'
|
118
|
+
end
|
119
|
+
|
120
|
+
unless p.nil?
|
121
|
+
conditions << p
|
122
|
+
where_clauses << 'p = ?'
|
123
|
+
end
|
124
|
+
|
125
|
+
unless o.nil?
|
126
|
+
conditions << o
|
127
|
+
where_clauses << 'o = ?'
|
128
|
+
end
|
129
|
+
|
130
|
+
# construct delete string
|
131
|
+
ds = 'delete from triple'
|
132
|
+
ds << " where #{where_clauses.join(' and ')}" unless where_clauses.empty?
|
133
|
+
|
134
|
+
# execute delete string with possible deletion conditions (for each
|
135
|
+
# non-empty where clause)
|
136
|
+
@db.execute(ds, *conditions)
|
137
|
+
$log.debug(sprintf("sending delete query: #{ds}", *conditions))
|
138
|
+
|
139
|
+
# delete literal from ferret index
|
140
|
+
@ferret.search_each("subject:\"#{s}\", object:\"#{o}\"") do |idx, score|
|
141
|
+
$log.debug "deleting #{o} => #{s} from ferret index"
|
142
|
+
@ferret.delete(idx)
|
143
|
+
end if keyword_search?
|
144
|
+
end
|
145
|
+
|
146
|
+
# adds triple(s,p,o) to datastore
|
147
|
+
# s,p must be resources, o can be primitive data or resource
|
148
|
+
def add(s,p,o)
|
149
|
+
# check illegal input
|
150
|
+
raise(ActiveRdfError, "adding non-resource #{s}") unless s.respond_to?(:uri)
|
151
|
+
raise(ActiveRdfError, "adding non-resource #{p}") unless p.respond_to?(:uri)
|
152
|
+
|
153
|
+
# get internal representation (array)
|
154
|
+
triple = internal_triple_representation(s,p,o)
|
155
|
+
|
156
|
+
# add triple to database
|
157
|
+
add_internal(*triple)
|
158
|
+
end
|
159
|
+
|
160
|
+
# flushes openstanding changes to underlying sqlite3
|
161
|
+
def flush
|
162
|
+
# since we always write changes into sqlite3 immediately, we don't do
|
163
|
+
# anything here
|
164
|
+
true
|
165
|
+
end
|
166
|
+
|
167
|
+
# loads triples from file in ntriples format
|
168
|
+
def load(file)
|
169
|
+
ntriples = File.readlines(file)
|
170
|
+
|
171
|
+
@db.transaction do
|
172
|
+
ntriples.each do |triple|
|
173
|
+
nodes = triple.scan(Node)
|
174
|
+
add_internal(nodes[0], nodes[1], nodes[2])
|
175
|
+
end
|
176
|
+
end
|
177
|
+
|
178
|
+
$log.debug "read #{ntriples.size} triples from file #{file}"
|
179
|
+
@db
|
180
|
+
end
|
181
|
+
|
182
|
+
# executes ActiveRDF query on datastore
|
183
|
+
def query(query)
|
184
|
+
# log received query
|
185
|
+
$log.debug "received query: #{query.to_sp}"
|
186
|
+
|
187
|
+
# construct query clauses
|
188
|
+
sql = translate(query)
|
189
|
+
|
190
|
+
# executing query, passing all where-clause values as parameters (so that
|
191
|
+
# sqlite will encode quotes correctly)
|
192
|
+
constraints = @right_hand_sides.collect { |value| value.to_s }
|
193
|
+
|
194
|
+
$log.debug format("executing: #{sql.gsub('?','"%s"')}", *constraints)
|
195
|
+
|
196
|
+
# executing query
|
197
|
+
results = @db.execute(sql, *constraints)
|
198
|
+
|
199
|
+
# if ASK query, we check whether we received a positive result count
|
200
|
+
if query.ask?
|
201
|
+
return [results[0][0].to_i > 0]
|
202
|
+
else
|
203
|
+
# otherwise we convert results to ActiveRDF nodes and return them
|
204
|
+
return wrap(query, results)
|
205
|
+
end
|
206
|
+
end
|
207
|
+
|
208
|
+
# translates ActiveRDF query into internal sqlite query string
|
209
|
+
def translate(query)
|
210
|
+
construct_select(query) + construct_join(query) + construct_where(query) +
|
211
|
+
construct_limit(query)
|
212
|
+
end
|
213
|
+
|
214
|
+
private
|
215
|
+
# constants for extracting resources/literals from sql results
|
216
|
+
Resource = /<([^>]*)>/
|
217
|
+
Literal = /"([^"]*)"/
|
218
|
+
Node = Regexp.union(/<[^>]*>/,/"[^"]*"/)
|
219
|
+
SPO = ['s','p','o']
|
220
|
+
|
221
|
+
# adds s,p,o into sqlite and ferret
|
222
|
+
# s,p,o should be in internal format: <uri> and "literal"
|
223
|
+
def add_internal(s,p,o)
|
224
|
+
# insert the triple into the datastore
|
225
|
+
@db.execute('insert into triple values (?,?,?)', s,p,o)
|
226
|
+
|
227
|
+
# if keyword-search available, insert the object into keyword search
|
228
|
+
@ferret << {:subject => s, :object => o} if keyword_search?
|
229
|
+
end
|
230
|
+
|
231
|
+
# construct select clause
|
232
|
+
def construct_select(query)
|
233
|
+
# ASK queries counts the results, and return true if results > 0
|
234
|
+
return "select count(*)" if query.ask?
|
235
|
+
|
236
|
+
# add select terms for each selectclause in the query
|
237
|
+
# the term names depend on the join conditions, e.g. t0.s or t1.p
|
238
|
+
select = query.select_clauses.collect do |term|
|
239
|
+
variable_name(query, term)
|
240
|
+
end
|
241
|
+
|
242
|
+
# add possible distinct and count functions to select clause
|
243
|
+
select_clause = ''
|
244
|
+
select_clause << 'distinct ' if query.distinct?
|
245
|
+
select_clause << select.join(', ')
|
246
|
+
select_clause = "count(#{select_clause})" if query.count?
|
247
|
+
|
248
|
+
"select " + select_clause
|
249
|
+
end
|
250
|
+
|
251
|
+
# construct (optional) limit and offset clauses
|
252
|
+
def construct_limit(query)
|
253
|
+
clause = ""
|
254
|
+
|
255
|
+
# if no limit given, use limit -1 (no limit)
|
256
|
+
limit = query.limits.nil? ? -1 : query.limits
|
257
|
+
|
258
|
+
# if no offset given, use offset 0
|
259
|
+
offset = query.offsets.nil? ? 0 : query.offsets
|
260
|
+
|
261
|
+
clause << " limit #{limit} offset #{offset}"
|
262
|
+
clause
|
263
|
+
end
|
264
|
+
|
265
|
+
# construct join clause
|
266
|
+
# TODO: joins don't work this way, they have to be linear (in one direction
|
267
|
+
# only, and we should only alias tables we didnt alias yet)
|
268
|
+
# we should only look for one join clause in each where-clause: when we find
|
269
|
+
# one, we skip the rest of the variables in this clause.
|
270
|
+
def construct_join(query)
|
271
|
+
join_stmt = ''
|
272
|
+
|
273
|
+
# no join necessary if only one where clause given
|
274
|
+
return ' from triple as t0 ' if query.where_clauses.size == 1
|
275
|
+
|
276
|
+
where_clauses = query.where_clauses.flatten
|
277
|
+
considering = where_clauses.uniq.select{|w| w.is_a?(Symbol)}
|
278
|
+
|
279
|
+
# constructing hash with indices for all terms
|
280
|
+
# e.g. {?s => [1,3,5], ?p => [2], ... }
|
281
|
+
term_occurrences = Hash.new()
|
282
|
+
where_clauses.each_with_index do |term, index|
|
283
|
+
ary = (term_occurrences[term] ||= [])
|
284
|
+
ary << index
|
285
|
+
end
|
286
|
+
|
287
|
+
aliases = {}
|
288
|
+
|
289
|
+
where_clauses.each_with_index do |term, index|
|
290
|
+
# if the term has been joined with his buddy already, we can skip it
|
291
|
+
next unless considering.include?(term)
|
292
|
+
|
293
|
+
# we find all (other) occurrences of this term
|
294
|
+
indices = term_occurrences[term]
|
295
|
+
|
296
|
+
# if the term doesnt have a join-buddy, we can skip it
|
297
|
+
next if indices.size == 1
|
298
|
+
|
299
|
+
# construct t0,t1,... as aliases for term
|
300
|
+
# and construct join condition, e.g. t0.s
|
301
|
+
termalias = "t#{index / 3}"
|
302
|
+
termjoin = "#{termalias}.#{SPO[index % 3]}"
|
303
|
+
|
304
|
+
join = if join_stmt.include?(termalias)
|
305
|
+
""
|
306
|
+
else
|
307
|
+
"triple as #{termalias}"
|
308
|
+
end
|
309
|
+
|
310
|
+
indices.each do |i|
|
311
|
+
# skip the current term itself
|
312
|
+
next if i==index
|
313
|
+
|
314
|
+
# construct t0,t1, etc. as aliases for buddy,
|
315
|
+
# and construct join condition, e.g. t0.s = t1.p
|
316
|
+
buddyalias = "t#{i/3}"
|
317
|
+
buddyjoin = "#{buddyalias}.#{SPO[i%3]}"
|
318
|
+
|
319
|
+
# TODO: fix reuse of same table names as aliases, e.g.
|
320
|
+
# "from triple as t1 join triple as t2 on ... join t1 on ..."
|
321
|
+
# is not allowed as such by sqlite
|
322
|
+
# but on the other hand, restating the aliases gives ambiguity:
|
323
|
+
# "from triple as t1 join triple as t2 on ... join triple as t1 ..."
|
324
|
+
# is ambiguous
|
325
|
+
join << " join triple as #{buddyalias} on #{termjoin} = #{buddyjoin} "
|
326
|
+
end
|
327
|
+
join_stmt << join
|
328
|
+
|
329
|
+
# remove term from 'todo' list of still-considered terms
|
330
|
+
considering.delete(term)
|
331
|
+
end
|
332
|
+
|
333
|
+
if join_stmt == ''
|
334
|
+
return " from triple as t0 "
|
335
|
+
else
|
336
|
+
return " from #{join_stmt} "
|
337
|
+
end
|
338
|
+
end
|
339
|
+
|
340
|
+
# construct where clause
|
341
|
+
def construct_where(query)
|
342
|
+
# collecting where clauses, these will be added to the sql string later
|
343
|
+
where = []
|
344
|
+
|
345
|
+
# collecting all the right-hand sides of where clauses (e.g. where name =
|
346
|
+
# 'abc'), to add to query string later using ?-notation, because then
|
347
|
+
# sqlite will automatically encode quoted literals correctly
|
348
|
+
@right_hand_sides = []
|
349
|
+
|
350
|
+
# convert each where clause to SQL:
|
351
|
+
# add where clause for each subclause, except if it's a variable
|
352
|
+
query.where_clauses.each_with_index do |clause,level|
|
353
|
+
clause.each_with_index do |subclause, i|
|
354
|
+
# dont add where clause for variables
|
355
|
+
unless subclause.is_a?(Symbol)
|
356
|
+
where << "t#{level}.#{SPO[i]} = ?"
|
357
|
+
@right_hand_sides << case subclause
|
358
|
+
when RDFS::Resource
|
359
|
+
"<#{subclause.uri}>"
|
360
|
+
else
|
361
|
+
subclause.to_s
|
362
|
+
end
|
363
|
+
end
|
364
|
+
end
|
365
|
+
end
|
366
|
+
|
367
|
+
# if keyword clause given, convert it using keyword index
|
368
|
+
if query.keyword?
|
369
|
+
subjects = []
|
370
|
+
select_subject = query.keywords.collect {|subj,key| subj}.uniq
|
371
|
+
raise ActiveRdfError, "cannot do keyword search over multiple subjects" if select_subject.size > 1
|
372
|
+
|
373
|
+
keywords = query.keywords.collect {|subj,key| key}
|
374
|
+
@ferret.search_each("object:\"#{keywords}\"") do |idx,score|
|
375
|
+
subjects << @ferret[idx][:subject]
|
376
|
+
end
|
377
|
+
subjects.uniq! if query.distinct?
|
378
|
+
where << "#{variable_name(query,select_subject.first)} in (#{subjects.collect {'?'}.join(',')})"
|
379
|
+
@right_hand_sides += subjects
|
380
|
+
end
|
381
|
+
|
382
|
+
if where.empty?
|
383
|
+
''
|
384
|
+
else
|
385
|
+
"where " + where.join(' and ')
|
386
|
+
end
|
387
|
+
end
|
388
|
+
|
389
|
+
# returns sql variable name for a queryterm
|
390
|
+
def variable_name(query,term)
|
391
|
+
# look up the first occurence of this term in the where clauses, and compute
|
392
|
+
# the level and s/p/o position of it
|
393
|
+
index = query.where_clauses.flatten.index(term)
|
394
|
+
|
395
|
+
if index.nil?
|
396
|
+
# term does not appear in where clause
|
397
|
+
# but maybe it appears in a keyword clause
|
398
|
+
|
399
|
+
# index would not be nil if we had:
|
400
|
+
# select(:o).where(knud, knows, :o).where(:o, :keyword, 'eyal')
|
401
|
+
#
|
402
|
+
# the only possibility that index is nil is if we have:
|
403
|
+
# select(:o).where(:o, :keyword, :eyal) (selecting subject)
|
404
|
+
# or if we use a select clause that does not appear in any where clause
|
405
|
+
|
406
|
+
# so we check if we find the term in the keyword clauses, otherwise we throw
|
407
|
+
# an error
|
408
|
+
if query.keywords.keys.include?(term)
|
409
|
+
return "t0.s"
|
410
|
+
else
|
411
|
+
raise ActiveRdfError,'unbound variable in select clause'
|
412
|
+
end
|
413
|
+
end
|
414
|
+
|
415
|
+
termtable = "t#{index / 3}"
|
416
|
+
termspo = SPO[index % 3]
|
417
|
+
return "#{termtable}.#{termspo}"
|
418
|
+
end
|
419
|
+
|
420
|
+
# wrap resources into ActiveRDF resources, literals into Strings
|
421
|
+
def wrap(query, results)
|
422
|
+
results.collect do |row|
|
423
|
+
row.collect do |result|
|
424
|
+
case result
|
425
|
+
when Resource
|
426
|
+
RDFS::Resource.new($1)
|
427
|
+
when Literal
|
428
|
+
String.new($1)
|
429
|
+
else
|
430
|
+
# when we do a count(*) query we get a number, not a resource/literal
|
431
|
+
results
|
432
|
+
end
|
433
|
+
end
|
434
|
+
end
|
435
|
+
end
|
436
|
+
|
437
|
+
def create_indices(params)
|
438
|
+
sidx = params[:sidx] || false
|
439
|
+
pidx = params[:pidx] || false
|
440
|
+
oidx = params[:oidx] || false
|
441
|
+
spidx = params[:spidx] || true
|
442
|
+
soidx = params[:soidx] || false
|
443
|
+
poidx = params[:poidx] || true
|
444
|
+
opidx = params[:opidx] || false
|
445
|
+
|
446
|
+
# creating lookup indices
|
447
|
+
@db.transaction do
|
448
|
+
@db.execute('create index if not exists sidx on triple(s)') if sidx
|
449
|
+
@db.execute('create index if not exists pidx on triple(p)') if pidx
|
450
|
+
@db.execute('create index if not exists oidx on triple(o)') if oidx
|
451
|
+
@db.execute('create index if not exists spidx on triple(s,p)') if spidx
|
452
|
+
@db.execute('create index if not exists soidx on triple(s,p)') if soidx
|
453
|
+
@db.execute('create index if not exists poidx on triple(p,o)') if poidx
|
454
|
+
@db.execute('create index if not exists opidx on triple(o,p)') if opidx
|
455
|
+
end
|
456
|
+
end
|
457
|
+
|
458
|
+
# transform triple into internal format <uri> and "literal"
|
459
|
+
# returns array [s,p,o]
|
460
|
+
def internal_triple_representation(s,p,o)
|
461
|
+
s = "<#{s.uri}>"
|
462
|
+
p = "<#{p.uri}>"
|
463
|
+
o = case o
|
464
|
+
when RDFS::Resource
|
465
|
+
"<#{o.uri}>"
|
466
|
+
else
|
467
|
+
"\"#{o.to_s}\""
|
468
|
+
end
|
469
|
+
[s,p,o]
|
470
|
+
end
|
471
|
+
end
|
data/test/test_data.nt
ADDED
@@ -0,0 +1,29 @@
|
|
1
|
+
<http://activerdf.org/test/Person> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2000/01/rdf-schema#Class> .
|
2
|
+
<http://activerdf.org/test/Person> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://www.w3.org/2000/01/rdf-schema#Resource> .
|
3
|
+
<http://activerdf.org/test/eyal> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://activerdf.org/test/Person> .
|
4
|
+
<http://activerdf.org/test/eyal> <http://activerdf.org/test/age> "27" .
|
5
|
+
<http://activerdf.org/test/eyal> <http://activerdf.org/test/name> "Eyal Oren" .
|
6
|
+
<http://activerdf.org/test/eyal> <http://activerdf.org/test/eye> "blue" .
|
7
|
+
<http://activerdf.org/test/age> <http://www.w3.org/2000/01/rdf-schema#domain> <http://www.w3.org/2000/01/rdf-schema#Resource> .
|
8
|
+
<http://activerdf.org/test/eye> <http://www.w3.org/2000/01/rdf-schema#domain> <http://www.w3.org/2000/01/rdf-schema#Resource> .
|
9
|
+
<http://activerdf.org/test/car> <http://www.w3.org/2000/01/rdf-schema#domain> <http://www.w3.org/2000/01/rdf-schema#Resource> .
|
10
|
+
<http://activerdf.org/test/age> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/1999/02/22-rdf-syntax-ns#Property> .
|
11
|
+
<http://activerdf.org/test/eye> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/1999/02/22-rdf-syntax-ns#Property> .
|
12
|
+
<http://activerdf.org/test/car> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/1999/02/22-rdf-syntax-ns#Property> .
|
13
|
+
<http://activerdf.org/test/age> <http://www.w3.org/2000/01/rdf-schema#domain> <http://activerdf.org/test/Person> .
|
14
|
+
<http://activerdf.org/test/age> <http://www.w3.org/2000/01/rdf-schema#range> <http://www.w3.org/1999/02/22-rdf-syntax-ns#Literal> .
|
15
|
+
<http://activerdf.org/test/eye> <http://www.w3.org/2000/01/rdf-schema#domain> <http://activerdf.org/test/Person> .
|
16
|
+
<http://activerdf.org/test/eye> <http://www.w3.org/2000/01/rdf-schema#range> <http://www.w3.org/1999/02/22-rdf-syntax-ns#Literal> .
|
17
|
+
<http://activerdf.org/test/car> <http://www.w3.org/2000/01/rdf-schema#domain> <http://activerdf.org/test/Person> .
|
18
|
+
<http://activerdf.org/test/car> <http://www.w3.org/2000/01/rdf-schema#range> <http://www.w3.org/1999/02/22-rdf-syntax-ns#Literal> .
|
19
|
+
<http://activerdf.org/test/Person> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2000/01/rdf-schema#Resource> .
|
20
|
+
<http://activerdf.org/test/eye> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2000/01/rdf-schema#Resource> .
|
21
|
+
<http://activerdf.org/test/eyal> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2000/01/rdf-schema#Resource> .
|
22
|
+
<http://activerdf.org/test/age> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2000/01/rdf-schema#Resource> .
|
23
|
+
<http://activerdf.org/test/car> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2000/01/rdf-schema#Resource> .
|
24
|
+
<http://www.w3.org/2000/01/rdf-schema#Class> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2000/01/rdf-schema#Class> .
|
25
|
+
<http://www.w3.org/2000/01/rdf-schema#Class> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2000/01/rdf-schema#Resource> .
|
26
|
+
<http://www.w3.org/1999/02/22-rdf-syntax-ns#Property> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2000/01/rdf-schema#Class> .
|
27
|
+
<http://www.w3.org/1999/02/22-rdf-syntax-ns#Property> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2000/01/rdf-schema#Resource> .
|
28
|
+
<http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2000/01/rdf-schema#domain> <http://www.w3.org/2000/01/rdf-schema#Resource> .
|
29
|
+
<http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2000/01/rdf-schema#range> <http://www.w3.org/2000/01/rdf-schema#Class> .
|
@@ -0,0 +1,142 @@
|
|
1
|
+
# Author:: Eyal Oren
|
2
|
+
# Copyright:: (c) 2005-2006
|
3
|
+
# License:: LGPL
|
4
|
+
|
5
|
+
require 'rubygems'
|
6
|
+
require 'test/unit'
|
7
|
+
require 'active_rdf'
|
8
|
+
require 'federation/federation_manager'
|
9
|
+
require 'queryengine/query'
|
10
|
+
|
11
|
+
class TestRdfLiteAdapter < Test::Unit::TestCase
|
12
|
+
def setup
|
13
|
+
ConnectionPool.clear
|
14
|
+
end
|
15
|
+
|
16
|
+
def teardown
|
17
|
+
end
|
18
|
+
|
19
|
+
def test_registration
|
20
|
+
adapter = ConnectionPool.add_data_source(:type => :rdflite)
|
21
|
+
assert_instance_of RDFLite, adapter
|
22
|
+
end
|
23
|
+
|
24
|
+
def test_initialise
|
25
|
+
adapter = ConnectionPool.add_data_source(:type => :rdflite, :keyword => false)
|
26
|
+
assert !adapter.keyword_search?
|
27
|
+
end
|
28
|
+
|
29
|
+
def test_initialise_with_user_params
|
30
|
+
#TODO: FIXME
|
31
|
+
end
|
32
|
+
|
33
|
+
def test_duplicate_registration
|
34
|
+
adapter1 = ConnectionPool.add_data_source(:type => :rdflite)
|
35
|
+
adapter2 = ConnectionPool.add_data_source(:type => :rdflite)
|
36
|
+
|
37
|
+
assert_equal adapter1, adapter2
|
38
|
+
assert_equal adapter1.object_id, adapter2.object_id
|
39
|
+
end
|
40
|
+
|
41
|
+
|
42
|
+
def test_simple_query
|
43
|
+
adapter = ConnectionPool.add_data_source(:type => :rdflite)
|
44
|
+
|
45
|
+
eyal = RDFS::Resource.new 'eyaloren.org'
|
46
|
+
age = RDFS::Resource.new 'foaf:age'
|
47
|
+
test = RDFS::Resource.new 'test'
|
48
|
+
|
49
|
+
adapter.add(eyal, age, test)
|
50
|
+
|
51
|
+
result = Query.new.distinct(:s).where(:s, :p, :o).execute
|
52
|
+
assert_instance_of RDFS::Resource, result
|
53
|
+
assert_equal 'eyaloren.org', result.uri
|
54
|
+
end
|
55
|
+
|
56
|
+
def test_federated_query
|
57
|
+
adapter1 = ConnectionPool.add_data_source(:type => :rdflite)
|
58
|
+
adapter2 = ConnectionPool.add_data_source(:type => :rdflite, :fake_symbol_to_get_unique_adapter => true)
|
59
|
+
|
60
|
+
eyal = RDFS::Resource.new 'eyaloren.org'
|
61
|
+
age = RDFS::Resource.new 'foaf:age'
|
62
|
+
test = RDFS::Resource.new 'test'
|
63
|
+
test2 = RDFS::Resource.new 'test2'
|
64
|
+
|
65
|
+
adapter1.add(eyal, age, test)
|
66
|
+
adapter2.add(eyal, age, test2)
|
67
|
+
|
68
|
+
# assert only one distinct subject is found (same one in both adapters)
|
69
|
+
assert_equal 1, Query.new.distinct(:s).where(:s, :p, :o).execute(:flatten=>false).size
|
70
|
+
|
71
|
+
# assert two distinct objects are found
|
72
|
+
results = Query.new.distinct(:o).where(:s, :p, :o).execute
|
73
|
+
assert_equal 2, results.size
|
74
|
+
|
75
|
+
results.all? {|result| assert result.instance_of?(RDFS::Resource) }
|
76
|
+
end
|
77
|
+
|
78
|
+
def test_query_with_block
|
79
|
+
adapter = ConnectionPool.add_data_source(:type => :rdflite)
|
80
|
+
|
81
|
+
eyal = RDFS::Resource.new 'eyaloren.org'
|
82
|
+
age = RDFS::Resource.new 'foaf:age'
|
83
|
+
test = RDFS::Resource.new 'test'
|
84
|
+
|
85
|
+
adapter.add(eyal, age, test)
|
86
|
+
Query.new.select(:s,:p).where(:s,:p,:o).execute do |s,p|
|
87
|
+
assert_equal 'eyaloren.org', s.uri
|
88
|
+
assert_equal 'foaf:age', p.uri
|
89
|
+
end
|
90
|
+
end
|
91
|
+
|
92
|
+
def test_loading_data
|
93
|
+
adapter = ConnectionPool.add_data_source :type => :rdflite
|
94
|
+
adapter.load(File.dirname(File.expand_path(__FILE__)) + '/test_data.nt')
|
95
|
+
assert_equal 29, adapter.size
|
96
|
+
assert_equal 29, Query.new.count(:s).where(:s,:p,:o).execute.to_i
|
97
|
+
end
|
98
|
+
|
99
|
+
def test_person_data
|
100
|
+
adapter = ConnectionPool.add_data_source :type => :rdflite
|
101
|
+
adapter.load(File.dirname(File.expand_path(__FILE__)) + '/test_data.nt')
|
102
|
+
|
103
|
+
Namespace.register(:test, 'http://activerdf.org/test/')
|
104
|
+
eyal = Namespace.lookup(:test, :eyal)
|
105
|
+
eye = Namespace.lookup(:test, :eye)
|
106
|
+
person = Namespace.lookup(:test, :Person)
|
107
|
+
type = Namespace.lookup(:rdf, :type)
|
108
|
+
resource = Namespace.lookup(:rdfs,:resource)
|
109
|
+
|
110
|
+
color = Query.new.select(:o).where(eyal, eye,:o).execute
|
111
|
+
assert 'blue', color
|
112
|
+
assert_instance_of String, color
|
113
|
+
|
114
|
+
ObjectManager.construct_classes
|
115
|
+
assert eyal.instance_of?(TEST::Person)
|
116
|
+
assert eyal.instance_of?(RDFS::Resource)
|
117
|
+
end
|
118
|
+
|
119
|
+
def test_delete_data
|
120
|
+
adapter = ConnectionPool.add_data_source :type => :rdflite
|
121
|
+
adapter.load(File.dirname(File.expand_path(__FILE__)) + '/test_data.nt')
|
122
|
+
assert_equal 29, adapter.size
|
123
|
+
|
124
|
+
eyal = RDFS::Resource.new('http://activerdf.org/test/eyal')
|
125
|
+
adapter.delete(eyal, nil, nil)
|
126
|
+
assert_equal 24, adapter.size
|
127
|
+
|
128
|
+
adapter.delete(nil,nil,nil)
|
129
|
+
assert_equal 0, adapter.size
|
130
|
+
end
|
131
|
+
|
132
|
+
def test_keyword_search
|
133
|
+
adapter = ConnectionPool.add_data_source :type => :rdflite
|
134
|
+
adapter.load(File.dirname(File.expand_path(__FILE__)) + '/test_data.nt')
|
135
|
+
|
136
|
+
eyal = RDFS::Resource.new('http://activerdf.org/test/eyal')
|
137
|
+
assert_equal eyal, Query.new.distinct(:s).where(:s,:keyword,"blue").execute
|
138
|
+
assert_equal eyal, Query.new.distinct(:s).where(:s,:keyword,"27").execute
|
139
|
+
|
140
|
+
assert_equal eyal, Query.new.distinct(:s).where(:s,:keyword,"eyal oren").execute
|
141
|
+
end
|
142
|
+
end
|
metadata
ADDED
@@ -0,0 +1,79 @@
|
|
1
|
+
--- !ruby/object:Gem::Specification
|
2
|
+
rubygems_version: 0.9.0
|
3
|
+
specification_version: 1
|
4
|
+
name: activerdf_rdflite
|
5
|
+
version: !ruby/object:Gem::Version
|
6
|
+
version: "1.0"
|
7
|
+
date: 2006-11-02 00:00:00 +00:00
|
8
|
+
summary: an RDF database for usage in ActiveRDF (based on sqlite3)
|
9
|
+
require_paths:
|
10
|
+
- lib
|
11
|
+
email:
|
12
|
+
homepage:
|
13
|
+
rubyforge_project:
|
14
|
+
description: an RDF database for usage in ActiveRDF (based on sqlite3)
|
15
|
+
autorequire:
|
16
|
+
default_executable:
|
17
|
+
bindir: bin
|
18
|
+
has_rdoc: true
|
19
|
+
required_ruby_version: !ruby/object:Gem::Version::Requirement
|
20
|
+
requirements:
|
21
|
+
- - ">"
|
22
|
+
- !ruby/object:Gem::Version
|
23
|
+
version: 0.0.0
|
24
|
+
version:
|
25
|
+
platform: ruby
|
26
|
+
signing_key:
|
27
|
+
cert_chain:
|
28
|
+
post_install_message:
|
29
|
+
authors:
|
30
|
+
- Eyal Oren <eyal.oren@deri.org
|
31
|
+
files:
|
32
|
+
- LICENSE
|
33
|
+
- README
|
34
|
+
- Rakefile
|
35
|
+
- test/test_rdflite.rb
|
36
|
+
- test/test_data.nt
|
37
|
+
- lib/activerdf_rdflite
|
38
|
+
- lib/activerdf_rdflite/init.rb
|
39
|
+
- lib/activerdf_rdflite/rdflite.rb
|
40
|
+
test_files: []
|
41
|
+
|
42
|
+
rdoc_options: []
|
43
|
+
|
44
|
+
extra_rdoc_files:
|
45
|
+
- README
|
46
|
+
executables: []
|
47
|
+
|
48
|
+
extensions: []
|
49
|
+
|
50
|
+
requirements: []
|
51
|
+
|
52
|
+
dependencies:
|
53
|
+
- !ruby/object:Gem::Dependency
|
54
|
+
name: gem_plugin
|
55
|
+
version_requirement:
|
56
|
+
version_requirements: !ruby/object:Gem::Version::Requirement
|
57
|
+
requirements:
|
58
|
+
- - ">="
|
59
|
+
- !ruby/object:Gem::Version
|
60
|
+
version: 0.2.1
|
61
|
+
version:
|
62
|
+
- !ruby/object:Gem::Dependency
|
63
|
+
name: activerdf
|
64
|
+
version_requirement:
|
65
|
+
version_requirements: !ruby/object:Gem::Version::Requirement
|
66
|
+
requirements:
|
67
|
+
- - ">="
|
68
|
+
- !ruby/object:Gem::Version
|
69
|
+
version: 0.9.2
|
70
|
+
version:
|
71
|
+
- !ruby/object:Gem::Dependency
|
72
|
+
name: sqlite3-ruby
|
73
|
+
version_requirement:
|
74
|
+
version_requirements: !ruby/object:Gem::Version::Requirement
|
75
|
+
requirements:
|
76
|
+
- - ">="
|
77
|
+
- !ruby/object:Gem::Version
|
78
|
+
version: 1.1.0
|
79
|
+
version:
|