aai 0.5.4 → 0.5.5
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/README.md +9 -1
- data/aai.gemspec +1 -1
- data/exe/aai +2 -2
- data/lib/aai/version.rb +1 -1
- metadata +6 -12
checksums.yaml
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@@ -1,7 +1,7 @@
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SHA1:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 4be485e8cb4b484a46f05a9c1d93b00ea88f2470
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data.tar.gz: 23e1c8c12d35afb90151248a7065027e934b5d34
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metadata.gz:
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metadata.gz: 05f461b49af6042eeff678a5e203c692ee08fb497b84eec4065864c0c05b7f847af8b06d28d23bce29418ddca4df12622a9be4c3e82309de40c9ce6ca6d316ac
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data.tar.gz: 7a14bd35a0515da46919fa54f82880c0c720b0fed8ea3b335ea45b7c1b0ad8c4ea357c03d4fba85347d8ce1b228dcc0973bb3dfa1ee1e6312ccd68b6ce6506f6
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data/README.md
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@@ -40,8 +40,16 @@ And then execute:
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### Example
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After installing with `gem install` then the `aai` program should be available to you. Try and get the help page:
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```
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$ aai --help
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```
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Then run the program like this:
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```
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$
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$ aai --infiles *.fa --outdir aai_output
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```
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### Options
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data/aai.gemspec
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@@ -31,5 +31,5 @@ Gem::Specification.new do |spec|
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spec.add_runtime_dependency "parallel", "~> 1.6", ">= 1.6.1"
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spec.add_runtime_dependency "parse_fasta", "~> 2.2"
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spec.add_runtime_dependency "systemu", "~> 2.6", ">= 2.6.5"
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spec.add_runtime_dependency "
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spec.add_runtime_dependency "optimist", "~> 3.0"
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end
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data/exe/aai
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@@ -5,7 +5,7 @@ Signal.trap("PIPE", "EXIT")
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require "aai"
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require "abort_if"
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require "fileutils"
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require "
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require "optimist"
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include AbortIf
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include AbortIf::Assert
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@@ -20,7 +20,7 @@ def move_files fnames, dest
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end
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end
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opts =
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opts = Optimist.options do
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version Aai::VERSION_BANNER
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banner <<-EOS
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data/lib/aai/version.rb
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metadata
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@@ -1,14 +1,14 @@
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--- !ruby/object:Gem::Specification
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name: aai
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version: !ruby/object:Gem::Version
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version: 0.5.
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version: 0.5.5
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platform: ruby
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authors:
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- Ryan Moore
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autorequire:
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bindir: exe
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cert_chain: []
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date:
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date: 2018-10-23 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: bundler
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@@ -149,25 +149,19 @@ dependencies:
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- !ruby/object:Gem::Version
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version: 2.6.5
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- !ruby/object:Gem::Dependency
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name:
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name: optimist
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requirement: !ruby/object:Gem::Requirement
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requirements:
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- - "~>"
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- !ruby/object:Gem::Version
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version: '
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- - ">="
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- !ruby/object:Gem::Version
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version: 2.1.2
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version: '3.0'
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type: :runtime
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prerelease: false
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
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- - "~>"
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- !ruby/object:Gem::Version
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version: '
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- - ">="
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- !ruby/object:Gem::Version
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version: 2.1.2
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version: '3.0'
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description: Calculate Seanie's amino acid similarity score between multiple genomes/bins.
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email:
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- moorer@udel.edu
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@@ -214,7 +208,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
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version: '0'
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requirements: []
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rubyforge_project:
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rubygems_version: 2.6.
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rubygems_version: 2.6.14
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signing_key:
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specification_version: 4
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summary: Seanie's amino acid similarity.
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