WatersOfOblivion-heychell7 0.0.1

data/History.txt

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+== 0.0.1 2009-06-23
+
+* 1 major enhancement:
+  * Initial release

data/Manifest.txt

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+History.txt
+Manifest.txt
+README.rdoc
+Rakefile
+lib/heychell7.rb
+script/console
+script/destroy
+script/generate
+spec/heychell7_spec.rb
+spec/spec.opts
+spec/spec_helper.rb
+tasks/rspec.rake

data/README.rdoc

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+= Heychell7
+
+* http://github.com/WatersOfOblivion/heychell7
+
+== DESCRIPTION:
+
+Ruby library for processing HL7
+
+== FEATURES/PROBLEMS:
+
+* None, yet.
+
+== SYNOPSIS:
+
+  # TODO
+
+== REQUIREMENTS:
+
+* None, yet
+
+== INSTALL:
+
+* sudo gem install WatersOfOblivion-heychell7
+
+== LICENSE:
+
+(The MIT License)
+
+Copyright (c) 2009 Jonathan Bryant
+
+Permission is hereby granted, free of charge, to any person obtaining
+a copy of this software and associated documentation files (the
+'Software'), to deal in the Software without restriction, including
+without limitation the rights to use, copy, modify, merge, publish,
+distribute, sublicense, and/or sell copies of the Software, and to
+permit persons to whom the Software is furnished to do so, subject to
+the following conditions:
+
+The above copyright notice and this permission notice shall be
+included in all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED 'AS IS', WITHOUT WARRANTY OF ANY KIND,
+EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
+IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
+CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
+TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
+SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

data/Rakefile

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+require 'rubygems' unless ENV['NO_RUBYGEMS']
+%w[rake rake/clean fileutils newgem rubigen].each { |f| require f }
+require File.dirname(__FILE__) + '/lib/heychell7'
+
+# Generate all the Rake tasks
+# Run 'rake -T' to see list of generated tasks (from gem root directory)
+$hoe = Hoe.new('heychell7', Heychell7::VERSION) do |p|
+  p.developer('Jonathan Bryant', 'jonathan@watersofoblivion.com')
+  p.changes              = p.paragraphs_of("History.txt", 0..1).join("\n\n")
+  # p.extra_deps         = [
+  #   ['activesupport','>= 2.0.2'],
+  # ]
+  p.extra_dev_deps = [
+    ['newgem', ">= #{::Newgem::VERSION}"]
+  ]
+
+  p.clean_globs |= %w[**/.DS_Store tmp *.log]
+  path = (p.rubyforge_name == p.name) ? p.rubyforge_name : "\#{p.rubyforge_name}/\#{p.name}"
+  p.remote_rdoc_dir = File.join(path.gsub(/^#{p.rubyforge_name}\/?/,''), 'rdoc')
+  p.rsync_args = '-av --delete --ignore-errors'
+end
+
+require 'newgem/tasks' # load /tasks/*.rake
+Dir['tasks/**/*.rake'].each { |t| load t }
+
+# TODO - want other tests/tasks run by default? Add them to the list
+task :default => :spec

data/lib/heychell7.rb

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+$:.unshift(File.dirname(__FILE__)) unless
+  $:.include?(File.dirname(__FILE__)) || $:.include?(File.expand_path(File.dirname(__FILE__)))
+
+module Heychell7
+  VERSION = '0.0.1'
+
+  class << self
+    def message &block
+      Message.instance_eval &block
+    end
+  end
+
+  class Parser
+    def initialize
+      @buffer = ""
+      @segments = []
+      @fields = []
+      @items = []
+      @stack = []
+    end
+
+    def parse str
+      @buffer += str.to_s
+      parse_re = /\n|\||\^|^\x0b|\x1c\r$/
+      while @buffer =~ parse_re do
+        case $&
+          when "\n"     then emit_segment $`
+          when "|"      then emit_field $`
+          when "^"      then emit_item $`
+          when "\x0b"   then emit_start
+          when "\x1c\r" then emit_end $`
+          else emit_error
+        end
+
+        @buffer = $'
+      end
+
+      reduce Segment, Message
+      @stack.pop
+    end
+
+    def parse_string str
+      parse "\x0b#{str}\x1c\r" unless str =~ /^\x0b.*\x1c\r$/
+    end
+
+    def parse_file filename
+      parse_string File.open(filename, "r").read
+    end
+
+    private
+
+    def emit_segment data
+      emit_field data
+      reduce Field, Segment
+    end
+
+    def emit_field data
+      emit_item data
+      reduce Item, Field
+    end
+
+    def emit_item data
+      @stack.push Item.new(data)
+    end
+
+    def emit_start
+      @items, @fields, @segments = [], [], []
+      @stack = []
+    end
+
+    def emit_end data
+      emit_segment data unless data.empty?
+    end
+
+    def emit_error
+      puts "Error!  Unexpected #{$&}"
+    end
+
+    def reduce source, target
+      tmp = []
+      target = target.new
+      while @stack.last.is_a? source
+        tmp << @stack.pop
+      end
+      tmp.reverse.each { |src| target << src }
+      @stack.push target
+    end
+  end
+
+  class Message
+    attr_accessor :segments
+
+    def initialize segments = []
+      @segments = segments
+    end
+
+    def << segment
+      @segments << segment
+    end
+
+    def to_hl7
+      @segments.map { |seg| seg.to_hl7 }.join("\n") + "\n"
+    end
+
+    def to_mllp
+      "\x0b#{self.to_hl7}\x1c\r"
+    end
+  end
+
+  class Segment
+    attr_accessor :fields
+
+    def initialize fields = []
+      @fields = fields
+    end
+
+    def << field
+      @fields << field
+    end
+
+    def to_hl7
+      @fields.map { |field| field.to_hl7 }.join("|")
+    end
+  end
+
+  class Field
+    attr_accessor :items
+
+    def initialize items = []
+      @items = items
+    end
+
+    def << item
+      @items << item
+    end
+
+    def to_hl7
+      @items.map { |item| item.to_hl7 }.join("^")
+    end
+  end
+
+  class Item
+    attr_accessor :data
+
+    def initialize data = nil
+      @data = data
+    end
+
+    def to_hl7
+      @data
+    end
+  end
+
+=begin
+  message do
+    segment :evn do
+      field :type_code
+      field :recorded_date
+      field :planned_date
+      field :reason_code
+      field :operator_id
+      field :event_occurred
+      field :event_facility
+    end
+
+    segment :msn do
+      field :ack_code
+      field :control_id
+      field :text
+      field :expected_seq
+      field :delayed_ack_type
+      field :error_cond
+    end
+
+    segment :msh do
+      field :enc_chars
+      field :sending_app
+      field :sending_facility
+      field :recv_app
+      field :recv_facility
+      field :time
+      field :security
+      field :message_type
+      field :message_control_id
+      field :processing_id
+      field :version_id
+      field :seq
+      field :continue_ptr
+      field :accept_ack_type
+      field :app_ack_type
+      field :country_code
+      field :charset
+    end
+
+    segment :nte do
+      field :set_id
+      field :source
+      field :comment
+      field :comment_type
+    end
+
+    segment :obr do
+      field :set_id
+      field :placer_order_number
+      field :filler_order_number
+      field :universal_service_id
+      field :priority
+      field :requested_date
+      field :observation_date
+      field :observation_end_date
+      field :collection_volume
+      field :colletor_identifier
+      field :specimen_action_code
+      field :danger_code
+      field :relevant_clinical_info
+      field :specimen_received_date
+      field :speciment_source
+      field :ordering_provider
+      field :order_callback_phone_number
+      field :placer_field_1
+      field :placer_field_2
+      field :filer_field_1
+      field :filer_field_2
+      field :results_status_change_date
+      field :charge_to_practice
+      field :parent_result
+      field :quantity_timing
+      field :result_copies_to
+      field :parent
+      field :transport_mode
+      field :reason_for_study
+      field :principal_result_interpreter
+      field :assistant_result_interpreter
+      field :technician
+      field :transcriptionist
+      field :scheduled_date
+      field :number_of_sample_containers
+      field :transport_logistics_of_sample
+      field :collectors_comment
+      field :transport_arrangement_responsibility
+      field :transport_arranged
+      field :escort_required
+      field :planned_patient_transport_comment
+      field :procedure_code
+      field :procedure_code_modified
+      field :placer_supplemental_service_info
+      field :filler_supplemental_service_info
+      field :medically_necessary_dup_procedure_reason
+      field :result_handling
+    end
+
+    segment :obx do
+      field :set_id
+      field :value_type
+      field :observation_id
+      field :observation_sub_id
+      field :observation_value
+      field :units
+      field :reference_range
+      field :abnormal_flags
+      field :probability
+      field :nature_of_abnormal_test
+      field :observation_result_status
+      field :effective_date_of_reference_range
+      field :user_defined_access_checks
+      field :observation_date
+      field :producer_id
+      field :responsible_observer
+      field :observation_method
+      field :equiptment_instance_id
+      field :analysis_date
+    end
+
+    segment :oru do
+      # ???
+    end
+
+    segment :pid do
+      field :set_id
+      field :patient_id
+      field :patient_id_list
+      field :alt_patient_id
+      field :patient_name
+      field :mother_maiden_name
+      field :patient_dob
+      field :admin_sex
+      field :patient_alias
+      field :race
+      field :address
+      field :country_code
+      field :phone_home
+      field :phone_business
+      field :primary_language
+      field :marital_status
+      field :religion
+      field :account_number
+      field :social_security_num
+      field :mothers_id
+      field :ethnic_group
+      field :birthplace
+      field :multi_birth
+      field :birth_order
+      field :citizenship
+      field :vet_status
+      field :nationality
+      field :death_date
+      field :death_indicator
+      field :id_unknown_indicator
+      field :id_readablity_code
+      field :last_update_date
+      field :last_update_facility
+      field :species_code
+      field :breed_code
+      field :strain
+      field :production_class_code
+      field :tribal_citizenship
+    end
+
+    segment :pv1 do
+      field :set_id
+      field :patient_class
+      field :assigned_location
+      field :admission_type
+      field :preadmit_number
+      field :prior_location
+      field :attending_doctor
+      field :referring_doctor
+      field :consulting_doctor
+      field :hospital_service
+      field :temporary_location
+      field :preadmit_indicator
+      field :readmit_indicator
+      field :admit_source
+      field :ambulatory_status
+      field :vip_indicator
+      field :admitting_doctor
+      field :patient_type
+      field :visit_number
+      field :financial_class
+      field :charge_price_indicator
+      field :courtesy_code
+      field :credit_rating
+      field :contract_code
+      field :contract_effective_date
+      field :contract_amount
+      field :contract_period
+      field :interest_code
+      field :transfer_bad_debt_code
+      field :transfer_bad_debt_date
+      field :bad_debt_agency_code
+      field :bad_debt_transfer_amount
+      field :bad_debt_recovery_amount
+      field :delete_account_indicator
+      field :delete_account_date
+      field :diet_type
+      field :servicing_facility
+      field :bed_status
+      field :account_status
+      field :pending_location
+      field :prior_temporary_location
+      field :admit_date
+      field :discharge_date
+      field :current_patient_balance
+      field :total_charges
+      field :total_adjustments
+      field :total_payments
+      field :alternative_visit_id
+      field :visit_indicator
+      field :other_healthcare_provider
+    end
+
+    segment :pv2 do
+      field :prior_pending_location
+      field :accomodation_code
+      field :admin_reason
+      field :transfer_reason
+      field :patient_valuables
+      field :patient_valuables_location
+      field :visit_user_code
+      field :expected_admit_date
+      field :expected_discharge_date
+      field :estimated_inpatient_stay_length
+      field :actual_inpatient_stay_length
+      field :visit_description
+      field :referral_source_code
+      field :previous_service_date
+      field :employment_illness_related_indicator
+      field :purge_status_code
+      field :purge_status_date
+      field :special_program_code
+      field :retention_indicator
+      field :expected_number_of_insurance_plans
+      field :visit_publicity_code
+      field :visit_protection_indicator
+      field :clinic_organization_name
+      field :patient_status_code
+      field :visit_priority_code
+      field :previous_treatment_date
+      field :expected_discharge_disposition
+      field :signature_on_file
+      field :first_similar_illness_date
+      field :patient_charge_adjustment_code
+      field :recurring_service_code
+      field :billing_media_code
+      field :expected_surgery_date
+      field :military_partnership_code
+      field :military_non_availibility_code
+      field :newborn_baby_indicator
+      field :baby_detained_indicator
+      field :mode_of_arrival_code
+      field :recreational_drug_use_code
+      field :precaution_code
+      field :patient_condition_code
+      field :living_will_code
+      field :organ_donor_code
+      field :advance_directive_code
+      field :patient_status_effective_date
+      field :expected_loa_return_date
+      field :expected_preadmission_testing_date
+      field :notify_clergy_code
+    end
+
+    segment :qrd do
+      field :query_date
+      field :query_format_code
+      field :query_priority
+      field :query_id
+      field :deferred_response_type
+      field :deferred_response_date
+      field :quantity_limited_request
+      field :who_subject_filter
+      field :what_subject_filter
+      field :what_department_code
+      field :what_data_code
+      field :query_results_level
+    end
+
+    segment :qrf do
+      field :where_subject_filter
+      field :when_start_date
+      field :when_end_date
+      field :what_user_qualifier
+      field :other_qry_subject_filter
+      field :which_date_qualifier
+      field :which_date_status_qualifier
+      field :date_selection_qualifier
+      field :when_timing_qualifier
+      field :search_confidence_threshold
+    end
+  end
+=end
+end

data/script/console

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+#!/usr/bin/env ruby
+# File: script/console
+irb = RUBY_PLATFORM =~ /(:?mswin|mingw)/ ? 'irb.bat' : 'irb'
+
+libs =  " -r irb/completion"
+# Perhaps use a console_lib to store any extra methods I may want available in the cosole
+# libs << " -r #{File.dirname(__FILE__) + '/../lib/console_lib/console_logger.rb'}"
+libs <<  " -r #{File.dirname(__FILE__) + '/../lib/heychell7.rb'}"
+puts "Loading heychell7 gem"
+exec "#{irb} #{libs} --simple-prompt"

data/script/destroy

@@ -0,0 +1,14 @@
+#!/usr/bin/env ruby
+APP_ROOT = File.expand_path(File.join(File.dirname(__FILE__), '..'))
+
+begin
+  require 'rubigen'
+rescue LoadError
+  require 'rubygems'
+  require 'rubigen'
+end
+require 'rubigen/scripts/destroy'
+
+ARGV.shift if ['--help', '-h'].include?(ARGV[0])
+RubiGen::Base.use_component_sources! [:rubygems, :newgem, :newgem_theme, :test_unit]
+RubiGen::Scripts::Destroy.new.run(ARGV)

data/script/generate

@@ -0,0 +1,14 @@
+#!/usr/bin/env ruby
+APP_ROOT = File.expand_path(File.join(File.dirname(__FILE__), '..'))
+
+begin
+  require 'rubigen'
+rescue LoadError
+  require 'rubygems'
+  require 'rubigen'
+end
+require 'rubigen/scripts/generate'
+
+ARGV.shift if ['--help', '-h'].include?(ARGV[0])
+RubiGen::Base.use_component_sources! [:rubygems, :newgem, :newgem_theme, :test_unit]
+RubiGen::Scripts::Generate.new.run(ARGV)

data/spec/heychell7_spec.rb

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+require File.dirname(__FILE__) + '/spec_helper.rb'
+
+# Time to add your specs!
+# http://rspec.info/
+describe "Place your specs here" do
+  
+  it "find this spec in spec directory" do
+    # violated "Be sure to write your specs"
+  end
+  
+end

data/spec/spec.opts

@@ -0,0 +1 @@
+--colour

data/spec/spec_helper.rb

@@ -0,0 +1,10 @@
+begin
+  require 'spec'
+rescue LoadError
+  require 'rubygems' unless ENV['NO_RUBYGEMS']
+  gem 'rspec'
+  require 'spec'
+end
+
+$:.unshift(File.dirname(__FILE__) + '/../lib')
+require 'heychell7'

data/tasks/rspec.rake

@@ -0,0 +1,21 @@
+begin
+  require 'spec'
+rescue LoadError
+  require 'rubygems' unless ENV['NO_RUBYGEMS']
+  require 'spec'
+end
+begin
+  require 'spec/rake/spectask'
+rescue LoadError
+  puts <<-EOS
+To use rspec for testing you must install rspec gem:
+    gem install rspec
+EOS
+  exit(0)
+end
+
+desc "Run the specs under spec/models"
+Spec::Rake::SpecTask.new do |t|
+  t.spec_opts = ['--options', "spec/spec.opts"]
+  t.spec_files = FileList['spec/**/*_spec.rb']
+end

metadata

@@ -0,0 +1,87 @@
+--- !ruby/object:Gem::Specification 
+name: WatersOfOblivion-heychell7
+version: !ruby/object:Gem::Version 
+  version: 0.0.1
+platform: ruby
+authors: 
+- Jonathan Bryant
+autorequire: 
+bindir: bin
+cert_chain: []
+
+date: 2009-06-24 00:00:00 -07:00
+default_executable: 
+dependencies: 
+- !ruby/object:Gem::Dependency 
+  name: newgem
+  type: :development
+  version_requirement: 
+  version_requirements: !ruby/object:Gem::Requirement 
+    requirements: 
+    - - ">="
+      - !ruby/object:Gem::Version 
+        version: 1.4.1
+    version: 
+- !ruby/object:Gem::Dependency 
+  name: hoe
+  type: :development
+  version_requirement: 
+  version_requirements: !ruby/object:Gem::Requirement 
+    requirements: 
+    - - ">="
+      - !ruby/object:Gem::Version 
+        version: 1.8.0
+    version: 
+description: Ruby library for processing HL7
+email: 
+- jonathan@watersofoblivion.com
+executables: []
+
+extensions: []
+
+extra_rdoc_files: 
+- History.txt
+- Manifest.txt
+- README.rdoc
+files: 
+- History.txt
+- Manifest.txt
+- README.rdoc
+- Rakefile
+- lib/heychell7.rb
+- script/console
+- script/destroy
+- script/generate
+- spec/heychell7_spec.rb
+- spec/spec.opts
+- spec/spec_helper.rb
+- tasks/rspec.rake
+has_rdoc: true
+homepage: http://github.com/WatersOfOblivion/heychell7
+post_install_message: 
+rdoc_options: 
+- --main
+- README.rdoc
+require_paths: 
+- lib
+required_ruby_version: !ruby/object:Gem::Requirement 
+  requirements: 
+  - - ">="
+    - !ruby/object:Gem::Version 
+      version: "0"
+  version: 
+required_rubygems_version: !ruby/object:Gem::Requirement 
+  requirements: 
+  - - ">="
+    - !ruby/object:Gem::Version 
+      version: "0"
+  version: 
+requirements: []
+
+rubyforge_project: heychell7
+rubygems_version: 1.2.0
+signing_key: 
+specification_version: 2
+summary: Ruby library for processing HL7
+test_files: []
+