NetAnalyzer 0.1.1 → 0.1.2
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- checksums.yaml +4 -4
- data/bin/NetAnalyzer.rb +0 -1
- data/lib/NetAnalyzer/network.rb +11 -9
- data/lib/NetAnalyzer/version.rb +1 -1
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA1:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 412854b58d2f6a2dbb1844cb943a90c9b96f7fd6
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4
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+
data.tar.gz: df275072cb0d1bb9b9d15099b089897471566eb8
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5
5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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+
metadata.gz: a6d3be799d9def07f7addef75dfad5a8d1c6b9d14c684d3dcb227b6be68ef22912ab069beb2e439d07a08b7dc2a6d7d0f38e873a1303a099c3c110c9cf6b075b
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7
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+
data.tar.gz: 561ad012584a397023897047b0e401a96246d39a67082f0c7cfd3ee6dc3cb8075d77d08bb75ae34a8174cbc13e5a8439f0348175f38133162f54ef9e6b55c07c
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data/bin/NetAnalyzer.rb
CHANGED
data/lib/NetAnalyzer/network.rb
CHANGED
@@ -206,9 +206,10 @@ class Network
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206
206
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end
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207
207
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208
208
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def get_geometric_associations(layers, base_layer)
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209
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+
#wang 2016 method
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209
210
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relations = get_associations(layers, base_layer) do |associatedIDs_node1, associatedIDs_node2, intersectedIDs, node1, node2|
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210
211
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intersectedIDs = intersectedIDs.length**2
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211
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-
productLength = associatedIDs_node1.length * associatedIDs_node2.length
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212
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+
productLength = Math.sqrt(associatedIDs_node1.length * associatedIDs_node2.length)
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212
213
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geometricValue = intersectedIDs.to_f/productLength
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213
214
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end
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214
215
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@association_values[:geometric] = relations
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@@ -250,14 +251,15 @@ class Network
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250
251
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#Using index from A layer proyected to B
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251
252
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(intersection_lengths..minLength).each do |i|
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252
253
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binom_product = binom(nA, i) * binom(ny - nA, nB - i)
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253
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-
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254
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-
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255
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-
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256
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-
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-
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-
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-
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260
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-
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254
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+
sum += binom_product.fdiv(binom(ny, nB))
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255
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+
# binom_product_float = binom_product.to_f
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256
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+
# to_f = false
|
257
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+
# if binom_product_float.infinite? # Handle bignum coercition to bigdecimal to avoid infinity values on float class.
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258
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+
# binom_product_float = BigDecimal.new(binom_product)
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259
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+
# to_f = true
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260
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+
# end
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261
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+
# sum += binom_product_float / binom(ny, nB)
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262
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+
# sum = sum.to_f if to_f # once the operation has finished, sum is corced from bigdecimal to float
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261
263
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end
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262
264
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if sum == 0
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263
265
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hypergeometricValue = 0
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data/lib/NetAnalyzer/version.rb
CHANGED
metadata
CHANGED
@@ -1,14 +1,14 @@
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1
1
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--- !ruby/object:Gem::Specification
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2
2
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name: NetAnalyzer
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3
3
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version: !ruby/object:Gem::Version
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4
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-
version: 0.1.
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4
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+
version: 0.1.2
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5
5
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platform: ruby
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6
6
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authors:
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7
7
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- Elena Rojano, Pedro Seoane
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8
8
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autorequire:
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9
9
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bindir: bin
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10
10
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cert_chain: []
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11
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-
date: 2017-
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11
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+
date: 2017-02-14 00:00:00.000000000 Z
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12
12
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dependencies:
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13
13
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- !ruby/object:Gem::Dependency
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14
14
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name: bundler
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